RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 H3BNC9 293 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 GPR182O15218 404 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 DGKIO75912 1065 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 STAG3L1P0CL83 205 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 PLCG1P19174 1290 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 GUCY2CP25092 1073 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 ARL2P36404 184 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 SLC12A3P55017 1021 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 NLRP11P59045 1033 aaKnown RBP10.96□□□□□ -0.65
GGA3-209ENST00000580646 GPM6BQ13491 265 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 MXD4Q14582 209 aaPredicted RBP10.96□□□□□ -0.65
GGA3-209ENST00000580646 KARSQ15046 597 aaKnown RBP10.96□□□□□ -0.65
GGA3-209ENST00000580646 SPECC1Q5M775 1068 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 USP49Q70CQ1 688 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 KCNK18Q7Z418 384 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 ZNF410Q86VK4 478 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 FAM228AQ86W67 206 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 NPAS4Q8IUM7 802 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 CRIPAKQ8N1N5 446 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 LRRC71Q8N4P6 559 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 RASSF8Q8NHQ8 419 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 PSPC1Q8WXF1 523 aaKnown RBP10.96□□□□□ -0.65
GGA3-209ENST00000580646 LARP4BQ92615 738 aaKnown RBP10.96□□□□□ -0.65
GGA3-209ENST00000580646 RAD54LQ92698 747 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 OSMRQ99650 979 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 SH2D3AQ9BRG2 576 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 C17orf75Q9HAS0 396 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 MAGEF1Q9HAY2 307 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 RC3H2Q9HBD1 1191 aaKnown RBP10.96□□□□□ -0.65
GGA3-209ENST00000580646 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 FAM13BQ9NYF5 915 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 AKT3Q9Y243 479 aa10.96□□□□□ -0.65
GGA3-209ENST00000580646 ADGRA3Q8IWK6 1321 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 MGEA5O60502 916 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 USO1O60763 962 aaKnown RBP10.95□□□□□ -0.66
GGA3-209ENST00000580646 RB1P06400 928 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 PLA2G4BP0C869 781 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 BMPR1AP36894 532 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 GPC3P51654 580 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 BTG3Q14201 252 aaPredicted RBP10.95□□□□□ -0.66
GGA3-209ENST00000580646 PCBP1Q15365 356 aaKnown RBP eCLIP10.95□□□□□ -0.66
GGA3-209ENST00000580646 NAALADL2Q58DX5 795 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 RRAGBQ5VZM2 374 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 RINT1Q6NUQ1 792 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 C1orf186Q6ZWK4 172 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
GGA3-209ENST00000580646 IQUBQ8NA54 791 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 KIFAP3Q92845 792 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
GGA3-209ENST00000580646 ADAM2Q99965 735 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 NFKBIZQ9BYH8 718 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 ADAMTS10Q9H324 1103 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 RGS18Q9NS28 235 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 SUCLA2Q9P2R7 463 aaPredicted RBP10.95□□□□□ -0.66
GGA3-209ENST00000580646 KCNG1Q9UIX4 513 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 LRFN2Q9ULH4 789 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 COG5Q9UP83 839 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 HPSEQ9Y251 543 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 COL4A3BPQ9Y5P4 624 aa10.95□□□□□ -0.66
GGA3-209ENST00000580646 DENND3A2RUS2 1198 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 LINC00271P0C7V0 271 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 EIF4BP23588 611 aaKnown RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 CTNNB1P35222 781 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 STAT6P42226 847 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 SARSP49591 514 aaKnown RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 TFF2Q03403 129 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 DRP2Q13474 957 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 TFDP1Q14186 410 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 PPP2R5AQ15172 486 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 ZRSR1Q15695 479 aaKnown RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 E2F4Q16254 413 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 PTPROQ16827 1216 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 AAK1Q2M2I8 961 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 SLC24A5Q71RS6 500 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 CMTR2Q8IYT2 770 aaKnown RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 LRRC15Q8TF66 581 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 KCNN1Q92952 543 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 CLP1Q92989 425 aaKnown RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 HLA-CQ95604 372 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 CHAMP1Q96JM3 812 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 ZNF668Q96K58 619 aaPredicted RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 INO80BQ9C086 356 aaPredicted RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 LRRC27Q9C0I9 530 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 TNMDQ9H2S6 317 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 C1orf112Q9NSG2 853 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
GGA3-209ENST00000580646 USP25Q9UHP3 1055 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 RWDD3Q9Y3V2 267 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 PCDHB7Q9Y5E2 793 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 TTC3P53804 2025 aa10.94□□□□□ -0.66
GGA3-209ENST00000580646 TRANK1O15050 2925 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 PHLPP2Q6ZVD8 1323 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 COL4A6Q14031 1691 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 A0A087WWV3 80 aa10.93□□□□□ -0.66
GGA3-209ENST00000580646 A0A087X0B3 334 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms