RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 ZC3H11AO75152 810 aaKnown RBP eCLIP15.31■□□□□ 0.04
GGA3-208ENST00000579743 SRGAP2CP0DJJ0 459 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 TECP42680 631 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 NEK4P51957 841 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 NPEPPSP55786 919 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 BCAR1P56945 870 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 TFDP1Q14186 410 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 CALCRLQ16602 461 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 NOMO2Q5JPE7 1267 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 CES5AQ6NT32 575 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 TMEM184AQ6ZMB5 413 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 LRRC55Q6ZSA7 311 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 TPH2Q8IWU9 490 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 SLC39A11Q8N1S5 342 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 CNNM3Q8NE01 707 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 PRPF31Q8WWY3 499 aaKnown RBP15.31■□□□□ 0.04
GGA3-208ENST00000579743 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 DHX33Q9H6R0 707 aaKnown RBP15.31■□□□□ 0.04
GGA3-208ENST00000579743 UBN1Q9NPG3 1134 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 C11orf16Q9NQ32 467 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 HCSTQ9UBK5 93 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 PCDHGC5Q9Y5F6 944 aa15.31■□□□□ 0.04
GGA3-208ENST00000579743 XIRP2A4UGR9 3374 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 GLP2RO95838 553 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 LAMTOR4Q0VGL1 99 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 EMC2Q15006 297 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 ANKRD54Q6NXT1 300 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 KSR1Q8IVT5 923 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 HACE1Q8IYU2 909 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 MRPL43Q8N983 215 aaKnown RBP15.3■□□□□ 0.04
GGA3-208ENST00000579743 OXER1Q8TDS5 423 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 HAS1Q92839 578 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 DYDC2Q96IM9 177 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 MTRQ99707 1265 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 KCNH6Q9H252 994 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 AGPAT5Q9NUQ2 364 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 RNF19AQ9NV58 838 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 CNTNAP2Q9UHC6 1331 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 MUC3AQ02505 3323 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 REV3LO60673 3130 aa15.3■□□□□ 0.04
GGA3-208ENST00000579743 NEMFO60524 1076 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 CTDNEP1O95476 244 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 CXCL14O95715 111 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 AXLP30530 894 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 PBX3P40426 434 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 CYP4A11Q02928 519 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 ITIH3Q06033 890 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 CBX2Q14781 532 aaPredicted RBP15.29■□□□□ 0.04
GGA3-208ENST00000579743 LLGL2Q6P1M3 1020 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 NECAB1Q8N987 351 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 RNF149Q8NC42 400 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 EDAQ92838 391 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 TMEM143Q96AN5 459 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 RPGRIP1Q96KN7 1286 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 NECTIN4Q96NY8 510 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 IFT122Q9HBG6 1241 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 MUTYHQ9UIF7 546 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 NR2E1Q9Y466 385 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 PCDHB2Q9Y5E7 798 aa15.29■□□□□ 0.04
GGA3-208ENST00000579743 SPDYE4A6NLX3 237 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 HIDE1A8MVS5 230 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 LOC730098B7Z3J9 87 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 NR1I2O75469 434 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 DGAT1O75907 488 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 ALDH2P05091 517 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 NR5A1Q13285 461 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 CTTNQ14247 550 aaKnown RBP15.28■□□□□ 0.04
GGA3-208ENST00000579743 ME3Q16798 604 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 LONRF3Q496Y0 759 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 ZBTB33Q86T24 672 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 DDX53Q86TM3 631 aaKnown RBP15.28■□□□□ 0.04
GGA3-208ENST00000579743 FERMT3Q86UX7 667 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 PPFIBP1Q86W92 1011 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 DIS3L2Q8IYB7 885 aaKnown RBP15.28■□□□□ 0.04
GGA3-208ENST00000579743 VPS52Q8N1B4 723 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 RIPOR3Q96MK2 946 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
GGA3-208ENST00000579743 GBP3Q9H0R5 595 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 TTC12Q9H892 705 aaPredicted RBP15.28■□□□□ 0.04
GGA3-208ENST00000579743 RSAD1Q9HA92 442 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 GJB4Q9NTQ9 266 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 DZANK1Q9NVP4 752 aa15.28■□□□□ 0.04
GGA3-208ENST00000579743 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
GGA3-208ENST00000579743 C2orf71A6NGG8 1288 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 NT5C1B-RDH14C9J2C7 533 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 OFD1O75665 1012 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 SLITRK3O94933 977 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 LYPLA2O95372 231 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 XRCC6P12956 609 aaKnown RBP eCLIP15.27■□□□□ 0.04
GGA3-208ENST00000579743 TXKP42681 527 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 POU5F1BQ06416 359 aa15.27■□□□□ 0.04
GGA3-208ENST00000579743 GNL2Q13823 731 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms