RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PPP2R5CQ13362 524 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 CALCRLQ16602 461 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 SYCE2Q6PIF2 218 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 B3GNT9Q6UX72 402 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 FBXL6Q8N531 539 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 HAS1Q92839 578 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 ZNF668Q96K58 619 aaPredicted RBP17.92■□□□□ 0.46
VAPA-204ENST00000577901 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 SPG21Q9NZD8 308 aa17.92■□□□□ 0.46
VAPA-204ENST00000577901 NOL7Q9UMY1 257 aaKnown RBP17.92■□□□□ 0.46
VAPA-204ENST00000577901 H3BQV1 296 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 NEMFO60524 1076 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 GPC3P51654 580 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 PRKCEQ02156 737 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 PTPN21Q16825 1174 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 CLLU1OSQ5K130 101 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 TMC7Q7Z402 723 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 NOSTRINQ8IVI9 506 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 SCLT1Q96NL6 688 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 PHOX2BQ99453 314 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 PRRX2Q99811 253 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 VAV3Q9UKW4 847 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 PCDHA12Q9UN75 941 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 USP34Q70CQ2 3546 aa17.91■□□□□ 0.46
VAPA-204ENST00000577901 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
VAPA-204ENST00000577901 DARSP14868 501 aaKnown RBP17.9■□□□□ 0.46
VAPA-204ENST00000577901 HOXB8P17481 243 aaPredicted RBP17.9■□□□□ 0.46
VAPA-204ENST00000577901 U2AF2P26368 475 aaKnown RBP eCLIP17.9■□□□□ 0.462e-7■■■□□ 17.5
VAPA-204ENST00000577901 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
VAPA-204ENST00000577901 ORC2Q13416 577 aaPredicted RBP17.9■□□□□ 0.46
VAPA-204ENST00000577901 UGCGQ16739 394 aa17.9■□□□□ 0.46
VAPA-204ENST00000577901 NLRP7Q8WX94 980 aa17.9■□□□□ 0.46
VAPA-204ENST00000577901 ASIC4Q96FT7 647 aa17.9■□□□□ 0.46
VAPA-204ENST00000577901 A0A0U1RQF3 1178 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 EOMESO95936 686 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 FGFR4P22455 802 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 MCM7P33993 719 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 TXKP42681 527 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 PSMC5P62195 406 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 CUL4AQ13619 759 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 SMC1AQ14683 1233 aaKnown RBP17.89■□□□□ 0.45
VAPA-204ENST00000577901 XKR3Q5GH77 459 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 MCTP1Q6DN14 999 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 ZNF598Q86UK7 904 aaKnown RBP17.89■□□□□ 0.45
VAPA-204ENST00000577901 SLC39A11Q8N1S5 342 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 MRPL43Q8N983 215 aaKnown RBP17.89■□□□□ 0.45
VAPA-204ENST00000577901 HELQQ8TDG4 1101 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 CASP10Q92851 521 aa17.89■□□□□ 0.45
VAPA-204ENST00000577901 TTC12Q9H892 705 aaPredicted RBP17.89■□□□□ 0.45
VAPA-204ENST00000577901 MYH9P35579 1960 aaKnown RBP17.89■□□□□ 0.45
VAPA-204ENST00000577901 C2orf71A6NGG8 1288 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 EML1O00423 815 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 P4HBP07237 508 aaKnown RBP17.88■□□□□ 0.45
VAPA-204ENST00000577901 SP100P23497 879 aaPredicted RBP17.88■□□□□ 0.45
VAPA-204ENST00000577901 QARSP47897 775 aaKnown RBP17.88■□□□□ 0.45
VAPA-204ENST00000577901 TCF15Q12870 199 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 EPHA7Q15375 998 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 TPRNQ4KMQ1 711 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
VAPA-204ENST00000577901 NCAPH2Q6IBW4 605 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 ZBTB33Q86T24 672 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 DACT1Q9NYF0 836 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 HCFC2Q9Y5Z7 792 aa17.88■□□□□ 0.45
VAPA-204ENST00000577901 WNT7AO00755 349 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 VCPP55072 806 aaKnown RBP17.87■□□□□ 0.45
VAPA-204ENST00000577901 DRP2Q13474 957 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 TARBP2Q15633 366 aaKnown RBP17.87■□□□□ 0.45
VAPA-204ENST00000577901 ZNF174Q15697 407 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 MTMR9Q96QG7 549 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 MRPL9Q9BYD2 267 aaKnown RBP17.87■□□□□ 0.45
VAPA-204ENST00000577901 NIFKQ9BYG3 293 aaKnown RBP17.87■□□□□ 0.45
VAPA-204ENST00000577901 GCOM2Q9BZD3 368 aaPredicted RBP17.87■□□□□ 0.45
VAPA-204ENST00000577901 TSHZ2Q9NRE2 1034 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 SEPT9Q9UHD8 586 aaPredicted RBP17.87■□□□□ 0.45
VAPA-204ENST00000577901 CDH22Q9UJ99 828 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 NR2E1Q9Y466 385 aa17.87■□□□□ 0.45
VAPA-204ENST00000577901 DDX11L8A8MPP1 907 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 NT5C1B-RDH14C9J2C7 533 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 CLASP2O75122 1294 aaKnown RBP17.86■□□□□ 0.45
VAPA-204ENST00000577901 CSDE1O75534 798 aaKnown RBP17.86■□□□□ 0.45
VAPA-204ENST00000577901 CA8P35219 290 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
VAPA-204ENST00000577901 BCAR1P56945 870 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 CES5AQ6NT32 575 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 ADAM7Q9H2U9 754 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 CHST12Q9NRB3 414 aa17.86■□□□□ 0.45
VAPA-204ENST00000577901 K7ELQ4 463 aaPredicted RBP17.85■□□□□ 0.45
VAPA-204ENST00000577901 CXCL14O95715 111 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 OR52Z1P0C646 297 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 PDCP20941 246 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 CDC42EP1Q00587 391 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 ITIH3Q06033 890 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 SPIRE1Q08AE8 756 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 BMS1Q14692 1282 aaKnown RBP17.85■□□□□ 0.45
VAPA-204ENST00000577901 MTERF2Q49AM1 385 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 KMT2EQ8IZD2 1858 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 KREMEN2Q8NCW0 462 aa17.85■□□□□ 0.45
VAPA-204ENST00000577901 SNX21Q969T3 373 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms