RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SESTD1Q86VW0 696 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RAB11FIP4Q86YS3 637 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 GALNT12Q8IXK2 581 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 MB21D2Q8IYB1 491 aaPredicted RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 C7orf31Q8N865 590 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 EPS8L3Q8TE67 593 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 AFAP1L1Q8TED9 768 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 ARNTL2Q8WYA1 636 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 SPATA33Q96N06 139 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 HHIPQ96QV1 700 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RBSNQ9H1K0 784 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 DNAJC25Q9H1X3 360 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RIOX1Q9H6W3 641 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RTEL1Q9NZ71 1219 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 GTF2IRD1Q9UHL9 959 aa7.19□□□□□ -1.26
NUP88-212ENST00000576708 RBM8AQ9Y5S9 174 aaKnown RBP7.19□□□□□ -1.26
NUP88-212ENST00000576708 SPTBN5Q9NRC6 3674 aaKnown RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 TANC1Q9C0D5 1861 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 ERICH2A1L162 156 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 PLEKHA8P1O95397 391 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 F2P00734 622 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 HMGB1P09429 215 aaKnown RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 CKBP12277 381 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 EDN3P14138 238 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 HOXB4P17483 251 aaPredicted RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 RXRAP19793 462 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 WDR5P61964 334 aaKnown RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 MRPS9P82933 396 aaKnown RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 TAGLNQ01995 201 aaKnown RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 TFF2Q03403 129 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 MBTPS1Q14703 1052 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 ENOX2Q16206 610 aaKnown RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 ZNF618Q5T7W0 954 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 PEAR1Q5VY43 1037 aaPredicted RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 CEP135Q66GS9 1140 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 FAM117BQ6P1L5 589 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 NCOA7Q8NI08 942 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 PPTC7Q8NI37 304 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 IGDCC4Q8TDY8 1250 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 RUFY2Q8WXA3 655 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 MAP4K1Q92918 833 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 NECAB3Q96P71 396 aaPredicted RBP7.18□□□□□ -1.26
NUP88-212ENST00000576708 ASB2Q96Q27 587 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 SLC9A7Q96T83 725 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 OSMRQ99650 979 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 C16orf70Q9BSU1 422 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 OSBPL7Q9BZF2 842 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 MAF1Q9H063 256 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 MLXIPQ9HAP2 919 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 LY9Q9HBG7 655 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 THEGQ9P2T0 379 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 TRIM33Q9UPN9 1127 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 MTCH2Q9Y6C9 303 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 MYH6P13533 1939 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 KIAA1217Q5T5P2 1943 aa7.18□□□□□ -1.26
NUP88-212ENST00000576708 CHD7Q9P2D1 2997 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 VCANP13611 3396 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 PTPRSQ13332 1948 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 hCG_1642624A0A1W2PR95 340 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 PRC1O43663 620 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 PPFIA4O75335 1185 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 CXCL10P02778 98 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 CCND2P30279 289 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 KCNJ6P48051 423 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 KCNQ1P51787 676 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 MRPS5P82675 430 aaKnown RBP7.17□□□□□ -1.26
NUP88-212ENST00000576708 SP4Q02446 784 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 GRB10Q13322 594 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 UTP14CQ5TAP6 766 aaKnown RBP7.17□□□□□ -1.26
NUP88-212ENST00000576708 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 USP17L6PQ6QN14 398 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 ADAMTSL4Q6UY14 1074 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
NUP88-212ENST00000576708 CYFIP1Q7L576 1253 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 CATIPQ7Z7H3 387 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 ZNF654Q8IZM8 581 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 TET1Q8NFU7 2136 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 CAGE1Q8TC20 777 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 PHOSPHO2Q8TCD6 241 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 ATXN2LQ8WWM7 1075 aaKnown RBP7.17□□□□□ -1.26
NUP88-212ENST00000576708 KATNAL1Q9BW62 490 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 LRRC2Q9BYS8 371 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 LACRTQ9GZZ8 138 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 LSG1Q9H089 658 aaKnown RBP7.17□□□□□ -1.26
NUP88-212ENST00000576708 RNF19AQ9NV58 838 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 DZANK1Q9NVP4 752 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 MAP3K20Q9NYL2 800 aaKnown RBP7.17□□□□□ -1.26
NUP88-212ENST00000576708 MTUS1Q9ULD2 1270 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 MYH7BA7E2Y1 1941 aa7.17□□□□□ -1.26
NUP88-212ENST00000576708 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
NUP88-212ENST00000576708 CUL9Q8IWT3 2517 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 A0A1W2PP55 124 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 KIF28PB7ZC32 967 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 SH2B2O14492 632 aaPredicted RBP7.16□□□□□ -1.26
NUP88-212ENST00000576708 SLC27A2O14975 620 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 LPXNO60711 386 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 LILRB5O75023 590 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
NUP88-212ENST00000576708 BAIAP3O94812 1187 aa7.16□□□□□ -1.26
NUP88-212ENST00000576708 LGALS2P05162 132 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms