RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 PKP1Q13835 747 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 SYCP1Q15431 976 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 PAN2Q504Q3 1202 aaKnown RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 YOD1Q5VVQ6 348 aaPredicted RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 RSPO2Q6UXX9 243 aaPredicted RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 PALM2Q8IXS6 379 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 C16orf71Q8IYS4 520 aaPredicted RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 ZGPATQ8N5A5 531 aaKnown RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 SH3RF2Q8TEC5 729 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 KISS1RQ969F8 398 aaPredicted RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 AJUBAQ96IF1 538 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 ZSCAN31Q96LW9 406 aaPredicted RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 THUMPD2Q9BTF0 503 aaKnown RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 TM6SF1Q9BZW5 370 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 LRRCC1Q9C099 1032 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 DLL4Q9NR61 685 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 ST7Q9NRC1 585 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 FTSJ1Q9UET6 329 aa4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.81□□□□□ -1.64
TOM1L1-212ENST00000572360 XRN1Q8IZH2 1706 aaKnown RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 USP54Q70EL1 1684 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 TTC21AQ8NDW8 1320 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 GOLGA6L6A8MZA4 724 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 PLSCR1O15162 318 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SUV39H1O43463 412 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 ZNF623O75123 536 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 CYP7B1O75881 506 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 CAVIN2O95810 425 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 AMHP03971 560 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 ERCC5P28715 1186 aaPredicted RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 PFKPQ01813 784 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SAFB2Q14151 953 aaKnown RBP eCLIP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 EIF4A2Q14240 407 aaKnown RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 NOLC1Q14978 699 aaKnown RBP eCLIP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SMAD2Q15796 467 aaKnown RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SKIDA1Q1XH10 827 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 HSP90AB4PQ58FF6 505 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SPDYAQ5MJ70 313 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 CD276Q5ZPR3 534 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 VASNQ6EMK4 673 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 TCTN3Q6NUS6 607 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 USP53Q70EK8 1073 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 NME9Q86XW9 330 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 TRIM48Q8IWZ4 208 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 ZFPM1Q8IX07 1006 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 STPG3Q8N7X2 389 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 OTUD7AQ8TE49 926 aaPredicted RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 GNRHR2Q96P88 292 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 WRNIP1Q96S55 665 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 MEIS3Q99687 375 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 GTPBP4Q9BZE4 634 aaKnown RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 KATNBL1Q9H079 304 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 DIAPH3Q9NSV4 1193 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SRRDQ9UH36 339 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 ZFP69BQ9UJL9 534 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 PRDM4Q9UKN5 801 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 TESMINQ9Y4I5 508 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 SLC4A7Q9Y6M7 1214 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 LMTK3Q96Q04 1460 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 ADGRL3Q9HAR2 1447 aa4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 FAM208AQ9UK61 1670 aaKnown RBP4.8□□□□□ -1.64
TOM1L1-212ENST00000572360 MAP3K5Q99683 1374 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 ELP1O95163 1332 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 RAD50Q92878 1312 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 ELL2O00472 640 aaPredicted RBP4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 KRIT1O00522 736 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 PRODHO43272 600 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 CHGBP05060 677 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 PTMAP06454 111 aaKnown RBP4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 HOXB7P09629 217 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 FGFR1P11362 822 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 GRK2P25098 689 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 GRK3P35626 688 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 SELENOPP49908 381 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 FAM193AP78312 1265 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 DDR2Q16832 855 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 CCDC30Q5VVM6 783 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 IGFL4Q6B9Z1 124 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 GPR155Q7Z3F1 870 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.79□□□□□ -1.647e-7■■□□□ 13.6
TOM1L1-212ENST00000572360 PDCL2Q8N4E4 241 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 SSH3Q8TE77 659 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 FBXO41Q8TF61 875 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 TTC14Q96N46 770 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 FEZ1Q99689 392 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 FUCA2Q9BTY2 467 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 ALDH8A1Q9H2A2 487 aaPredicted RBP4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 BARX1Q9HBU1 254 aaPredicted RBP4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 LIMCH1Q9UPQ0 1083 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 HDAC5Q9UQL6 1122 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 RIMS1Q86UR5 1692 aaKnown RBP4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 USP6P35125 1406 aa4.79□□□□□ -1.64
TOM1L1-212ENST00000572360 SBNO1A3KN83 1393 aa4.78□□□□□ -1.64
TOM1L1-212ENST00000572360 CACNA1FO60840 1977 aa4.78□□□□□ -1.64
TOM1L1-212ENST00000572360 TTC41PQ6P2S7 1318 aa4.78□□□□□ -1.64
TOM1L1-212ENST00000572360 IGSF1Q8N6C5 1336 aa4.78□□□□□ -1.64
TOM1L1-212ENST00000572360 PEAK1Q9H792 1746 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms