RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 VCAM1P19320 739 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 EPHB4P54760 987 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 GNPTABQ3T906 1256 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 SYCP2LQ5T4T6 812 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 SLC7A3Q8WY07 619 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 C1orf112Q9NSG2 853 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 PCDHB4Q9Y5E5 795 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 MYH6P13533 1939 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 IRS2Q9Y4H2 1338 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 MOB2Q70IA6 237 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 FRMD5Q7Z6J6 570 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 TSEN2Q8NCE0 465 aaKnown RBP17.51■□□□□ 0.39
RAB40B-206ENST00000571995 TTYH3Q9C0H2 523 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 HSPBP1Q9NZL4 362 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 STRCQ7RTU9 1775 aa17.51■□□□□ 0.39
RAB40B-206ENST00000571995 K7ERI5 159 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 PGK2P07205 417 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 TUBB4BP68371 445 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 EPHA7Q15375 998 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 LRRC71Q8N4P6 559 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 GMCL1Q96IK5 515 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 NT5C1BQ96P26 610 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 EXOC7Q9UPT5 735 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 MYZAPP0CAP1 466 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 SOX5P35711 763 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 PDE6CP51160 858 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 SMAD1Q15797 465 aaKnown RBP17.5■□□□□ 0.39
RAB40B-206ENST00000571995 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 MSANTD4Q8NCY6 345 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
RAB40B-206ENST00000571995 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 KCTD10Q9H3F6 313 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 ELP3Q9H9T3 547 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 TBK1Q9UHD2 729 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 ORC1Q13415 861 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 NAB2Q15742 525 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 TKFCQ3LXA3 575 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 TTC16Q8NEE8 873 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 WNK4Q96J92 1243 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 C11orf70Q9BRQ4 267 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 MED4Q9NPJ6 270 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 COL20A1Q9P218 1284 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 NOVA2Q9UNW9 492 aaKnown RBP17.5■□□□□ 0.39
RAB40B-206ENST00000571995 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
RAB40B-206ENST00000571995 A0A1W2PQJ5 194 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ORC2Q13416 577 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-206ENST00000571995 UAP1Q16222 522 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-206ENST00000571995 CCDC38Q502W7 563 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 USP37Q86T82 979 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ANKRD42Q8N9B4 389 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 C1orf54Q8WWF1 131 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ATP8B1O43520 1251 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 CNTN2Q02246 1040 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 BFSP1Q12934 665 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 PPFIA1Q13136 1202 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 SPOPLQ6IQ16 392 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 TMEM270Q6UE05 265 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 CPLX4Q7Z7G2 160 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB40B-206ENST00000571995 EXOC4Q96A65 974 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ACSF2Q96CM8 615 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ZIM3Q96PE6 472 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 TSKSQ9UJT2 592 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ASTN1O14525 1302 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 SSU72P8A0A1W2PR75 194 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 EDRF1Q3B7T1 1238 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 ZNF720Q7Z2F6 126 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 SESTD1Q86VW0 696 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 UBL4BQ8N7F7 174 aa17.49■□□□□ 0.39
RAB40B-206ENST00000571995 DDX3XO00571 662 aaKnown RBP eCLIP17.48■□□□□ 0.392e-22■■■■□ 20.3
RAB40B-206ENST00000571995 SEC24CP53992 1094 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 CALCOCO2Q13137 446 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 LLGL2Q6P1M3 1020 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 IQCDQ96DY2 449 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 TGFB1I1O43294 461 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 SGPL1O95470 568 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 LMNB1P20700 586 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 HGSNATQ68CP4 663 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 ATP6V0A1Q93050 837 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 UBR2Q8IWV8 1755 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 MYH8P13535 1937 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 UGCGQ16739 394 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 SYTL5Q8TDW5 730 aaPredicted RBP17.48■□□□□ 0.39
RAB40B-206ENST00000571995 CASKIN2Q8WXE0 1202 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 AS3MTQ9HBK9 375 aa17.48■□□□□ 0.39
RAB40B-206ENST00000571995 GOLGA6L7A0A1B0GV03 622 aa17.47■□□□□ 0.39
RAB40B-206ENST00000571995 THAP12O43422 761 aa17.47■□□□□ 0.39
RAB40B-206ENST00000571995 VIMP08670 466 aaKnown RBP17.47■□□□□ 0.39
RAB40B-206ENST00000571995 CLK2P49760 499 aaKnown RBP17.47■□□□□ 0.39
RAB40B-206ENST00000571995 ARHGEF19Q8IW93 802 aa17.47■□□□□ 0.39
RAB40B-206ENST00000571995 KIFAP3Q92845 792 aa17.47■□□□□ 0.39
RAB40B-206ENST00000571995 DCPSQ96C86 337 aaKnown RBP17.47■□□□□ 0.39
RAB40B-206ENST00000571995 POLR3FQ9H1D9 316 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms