RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 HSCBQ8IWL3 235 aa14.07□□□□□ -0.16
TVP23B-204ENST00000571018 ASAP3Q8TDY4 903 aa14.07□□□□□ -0.16
TVP23B-204ENST00000571018 PPM1EQ8WY54 764 aa14.07□□□□□ -0.16
TVP23B-204ENST00000571018 MMTAG2Q9BU76 263 aaKnown RBP14.07□□□□□ -0.16
TVP23B-204ENST00000571018 NFKBIZQ9BYH8 718 aa14.07□□□□□ -0.16
TVP23B-204ENST00000571018 POLR3FQ9H1D9 316 aaPredicted RBP14.07□□□□□ -0.16
TVP23B-204ENST00000571018 BHMT2Q9H2M3 363 aa14.07□□□□□ -0.16
TVP23B-204ENST00000571018 AGPAT5Q9NUQ2 364 aa14.07□□□□□ -0.16
TVP23B-204ENST00000571018 DDX19AQ9NUU7 478 aaKnown RBP14.07□□□□□ -0.16
TVP23B-204ENST00000571018 PIN4Q9Y237 131 aaKnown RBP14.07□□□□□ -0.16
TVP23B-204ENST00000571018 MRPL42Q9Y6G3 142 aaKnown RBP14.07□□□□□ -0.16
TVP23B-204ENST00000571018 VWA3AA6NCI4 1184 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 HOXA2O43364 376 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 FGFR1P11362 822 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 CTNNB1P35222 781 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 RESTQ13127 1097 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 GPM6BQ13491 265 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 SF3A1Q15459 793 aaKnown RBP14.06□□□□□ -0.16
TVP23B-204ENST00000571018 HYIQ5T013 277 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
TVP23B-204ENST00000571018 MAEAQ7L5Y9 396 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
TVP23B-204ENST00000571018 KCTD17Q8N5Z5 321 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 C11orf84Q9BUA3 381 aaPredicted RBP14.06□□□□□ -0.16
TVP23B-204ENST00000571018 PLVAPQ9BX97 442 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 GPRC5CQ9NQ84 441 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 RNF19AQ9NV58 838 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 DNM3Q9UQ16 869 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 MTMR6Q9Y217 621 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 CHD9Q3L8U1 2897 aa14.06□□□□□ -0.16
TVP23B-204ENST00000571018 COL4A4P53420 1690 aaPredicted RBP14.05□□□□□ -0.16
TVP23B-204ENST00000571018 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 E9PMD0 336 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 STX6O43752 255 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 ZNF623O75123 536 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 EYA4O95677 639 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 SKIP12755 728 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
TVP23B-204ENST00000571018 HOXA11P31270 313 aaPredicted RBP14.05□□□□□ -0.16
TVP23B-204ENST00000571018 RAB27AP51159 221 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 P2RX5Q93086 422 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 MRPL38Q96DV4 380 aaKnown RBP14.05□□□□□ -0.16
TVP23B-204ENST00000571018 AK8Q96MA6 479 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 CASD1Q96PB1 797 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 FAM105AQ9NUU6 356 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 RALGAPA2Q2PPJ7 1873 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 CDH23Q9H251 3354 aa14.05□□□□□ -0.16
TVP23B-204ENST00000571018 INO80B-WBP1J3KQ70 363 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 TSPAN1O60635 241 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 ERLIN2O94905 339 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 AXLP30530 894 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 MBTD1Q05BQ5 628 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 PTPROQ16827 1216 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 NAALADL2Q58DX5 795 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 CLLU1OSQ5K130 101 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 ABI1Q8IZP0 508 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 RNF169Q8NCN4 708 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 PNMA5Q96PV4 448 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 NT5C3AQ9H0P0 336 aa14.04□□□□□ -0.16
TVP23B-204ENST00000571018 ZSCAN16Q9H4T2 348 aaPredicted RBP14.04□□□□□ -0.16
TVP23B-204ENST00000571018 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
TVP23B-204ENST00000571018 MYO9BQ13459 2157 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 GRM6O15303 877 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 SLC26A4O43511 780 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
TVP23B-204ENST00000571018 LONP1P36776 959 aaKnown RBP14.03□□□□□ -0.16
TVP23B-204ENST00000571018 NAMPTP43490 491 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 NCBP1Q09161 790 aaKnown RBP14.03□□□□□ -0.16
TVP23B-204ENST00000571018 PTPAQ15257 358 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 AMHR2Q16671 573 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 UBXN11Q5T124 520 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 FAM173BQ6P4H8 233 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 MRPL10Q7Z7H8 261 aaKnown RBP14.03□□□□□ -0.16
TVP23B-204ENST00000571018 CABP7Q86V35 215 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 RSPH1Q8WYR4 309 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 BSNDQ8WZ55 320 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 KIFAP3Q92845 792 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 LMAN2LQ9H0V9 348 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 CWH43Q9H720 699 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 PRDM6Q9NQX0 595 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 AAASQ9NRG9 546 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 PLAGL2Q9UPG8 496 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 PCDHB2Q9Y5E7 798 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 CLIC4Q9Y696 253 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 NLRC5Q86WI3 1866 aa14.03□□□□□ -0.16
TVP23B-204ENST00000571018 FNDC1Q4ZHG4 1894 aaPredicted RBP14.02□□□□□ -0.16
TVP23B-204ENST00000571018 HSP90AA1P07900 732 aaKnown RBP14.02□□□□□ -0.17
TVP23B-204ENST00000571018 UBA7P41226 1012 aa14.02□□□□□ -0.17
TVP23B-204ENST00000571018 GRIN1Q05586 938 aa14.02□□□□□ -0.17
TVP23B-204ENST00000571018 PPP2R5AQ15172 486 aa14.02□□□□□ -0.17
TVP23B-204ENST00000571018 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.17
TVP23B-204ENST00000571018 SPOUT1Q5T280 376 aaKnown RBP14.02□□□□□ -0.17
TVP23B-204ENST00000571018 CDCA2Q69YH5 1023 aaPredicted RBP14.02□□□□□ -0.17
TVP23B-204ENST00000571018 NOTUMQ6P988 496 aa14.02□□□□□ -0.17
TVP23B-204ENST00000571018 LRRC55Q6ZSA7 311 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms