RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 PASD1Q8IV76 773 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 GALNT12Q8IXK2 581 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 FAM160A2Q8N612 972 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 NEDD1Q8NHV4 660 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 ZDHHC1Q8WTX9 485 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CTAGE1Q96RT6 745 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CRAMP1Q96RY5 1269 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SH3GL2Q99962 352 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 JPH2Q9BR39 696 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 FAM205AQ6ZU69 1335 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 AGPSO00116 658 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 EREGO14944 169 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 ADAMTS3O15072 1205 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 HTR3AP46098 478 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CDK8P49336 464 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 AMPD2Q01433 879 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 PLCB4Q15147 1175 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CDKAL1Q5VV42 579 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SLC44A5Q8NCS7 719 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SLC7A3Q8WY07 619 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 EYA3Q99504 573 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SPZ1Q9BXG8 430 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 NAA15Q9BXJ9 866 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 KCNQ5Q9NR82 932 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 RMND1Q9NWS8 449 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SAP30BPQ9UHR5 308 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 PCDHA6Q9UN73 950 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 STX8Q9UNK0 236 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 PCDHA8Q9Y5H6 950 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SNED1Q8TER0 1413 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 GAKO14976 1311 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 TARSL2A2RTX5 802 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 STXBP3O00186 592 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 LAD1O00515 517 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CYTH3O43739 400 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 ZEB2O60315 1214 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SMARCA1P28370 1054 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 FCGRTP55899 365 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 IRX1P78414 480 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 SLC35G1Q2M3R5 365 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 HSP90AA4PQ58FG1 418 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 LMBRD2Q68DH5 695 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 EPM2AIP1Q7L775 607 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 RASGRP2Q7LDG7 609 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 ARMC2Q8NEN0 867 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 TBC1D16Q8TBP0 767 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 MAGEC3Q8TD91 643 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 BAP1Q92560 729 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 ELAC2Q9BQ52 826 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 IRX2Q9BZI1 471 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 AAASQ9NRG9 546 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 SUCOQ9UBS9 1254 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 TRPC5Q9UL62 973 aaPredicted RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 PHTF1Q9UMS5 762 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 FLT1P17948 1338 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 AFF2P51816 1311 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 KLRG2A4D1S0 409 aaPredicted RBP8.74□□□□□ -1.01
TCF4-246ENST00000570287 CASP1P29466 404 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 PPFIA1Q13136 1202 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 DTHD1Q6ZMT9 781 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 APTXQ7Z2E3 356 aaKnown RBP8.74□□□□□ -1.01
TCF4-246ENST00000570287 GIMAP7Q8NHV1 300 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 MYO1AQ9UBC5 1043 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 PCDHB10Q9UN67 800 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 LRRC37AA6NMS7 1700 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 KLRF2D3W0D1 207 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 MCM3P25205 808 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 FLT3P36888 993 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 NOVP48745 357 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 GTF2A2P52657 109 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 PSMA6P60900 246 aaKnown RBP8.74□□□□□ -1.01
TCF4-246ENST00000570287 FILIP1LQ4L180 1135 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 MFSD14BQ5SR56 506 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 KLHL10Q6JEL2 608 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 GPR153Q6NV75 609 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 POF1BQ8WVV4 589 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 MMTAG2Q9BU76 263 aaKnown RBP8.74□□□□□ -1.01
TCF4-246ENST00000570287 FBRSQ9HAH7 460 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 VEZTQ9HBM0 779 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 POLLQ9UGP5 575 aa8.74□□□□□ -1.01
TCF4-246ENST00000570287 MYH1P12882 1939 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 CTAGE15A4D2H0 777 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 CTAGE9A4FU28 777 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 A6NNZ2 444 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 EML1O00423 815 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 RASSF9O75901 435 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 PARP1P09874 1014 aaKnown RBP8.73□□□□□ -1.01
TCF4-246ENST00000570287 CTAGE8P0CG41 777 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 TFE3P19532 575 aaPredicted RBP8.73□□□□□ -1.01
TCF4-246ENST00000570287 LMNB1P20700 586 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
TCF4-246ENST00000570287 PRPHP41219 470 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 ZNF658Q5TYW1 1059 aaPredicted RBP8.73□□□□□ -1.01
TCF4-246ENST00000570287 CTAGE6Q86UF2 777 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 CTAGE4Q8IX94 777 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 ZSWIM2Q8NEG5 633 aa8.73□□□□□ -1.01
TCF4-246ENST00000570287 ZBED2Q9BTP6 218 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms