RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NEIL1Q96FI4 390 aaPredicted RBP5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 QRSL1Q9H0R6 528 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 AGO3Q9H9G7 860 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 SEC61A2Q9H9S3 476 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 ZNF277Q9NRM2 450 aaPredicted RBP5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 HOMER2Q9NSB8 354 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 DPP7Q9UHL4 492 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 NR2E1Q9Y466 385 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 PCDHGA8Q9Y5G5 932 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 PCDHGA7Q9Y5G6 932 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 PCDHGA6Q9Y5G7 932 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 PCDHGA2Q9Y5H1 932 aa5.34□□□□□ -1.55
HERPUD1-212ENST00000567944 TMEM127O75204 238 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 CTSWP56202 376 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 SESN2P58004 480 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 ATP2C1P98194 919 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 ITKQ08881 620 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 ABCB5Q2M3G0 1257 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 MUM1Q2TAK8 710 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 CCDC178Q5BJE1 867 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 TOR2AQ5JU69 321 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 UBXN11Q5T124 520 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 LIMS2Q7Z4I7 341 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 GPR135Q8IZ08 494 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 GFM2Q969S9 779 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 MTMR8Q96EF0 704 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 RAX2Q96IS3 184 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 GNRHR2Q96P88 292 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 GPHA2Q96T91 129 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 DPYSL5Q9BPU6 564 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 DDX56Q9NY93 547 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 RBM8AQ9Y5S9 174 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-212ENST00000567944 MAFGO15525 162 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 ITGB3P05106 788 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 RBP3P10745 1247 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 IGBP1P78318 339 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 SURF1Q15526 300 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 SLFN13Q68D06 897 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 ADGRE4PQ86SQ3 457 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 UNC5BQ8IZJ1 945 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 MSL3Q8N5Y2 521 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 PLA2G15Q8NCC3 412 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 KRTAP9-8Q9BYQ0 159 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 DNAJC28Q9NX36 388 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 SCOCQ9UIL1 159 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 SYNPO2Q9UMS6 1093 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
HERPUD1-212ENST00000567944 PMS2P1A4D2B8 440 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 TOX4O94842 621 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 MT-CO1P00395 513 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 AGXTP21549 392 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 ANAPC15P60006 121 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 RAC3P60763 192 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 CDK17Q00537 523 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 MGAT5Q09328 741 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 TCIRG1Q13488 830 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 NFIXQ14938 502 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 DNERQ8NFT8 737 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 CXorf38Q8TB03 319 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 LPPQ93052 612 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 SLC7A6OSQ96CW6 309 aaPredicted RBP5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 FUBP3Q96I24 572 aaKnown RBP eCLIP5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 FAXDC2Q96IV6 333 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 LRRC37BQ96QE4 947 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 LMF1Q96S06 567 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 SLC6A15Q9H2J7 730 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 IFT122Q9HBG6 1241 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 JADE2Q9NQC1 790 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 TYW1Q9NV66 732 aaKnown RBP5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 ING3Q9NXR8 418 aa5.31□□□□□ -1.56
HERPUD1-212ENST00000567944 WASHC2AQ641Q2 1341 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 SLC26A4O43511 780 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 FOXS1O43638 330 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 FSBPO95073 299 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 PDGFRBP09619 1106 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 OSMP13725 252 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 CR2P20023 1033 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 KIR2DL3P43628 341 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 BPIFB4P59827 614 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 EXOSC10Q01780 885 aaKnown RBP5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 SPIDRQ14159 915 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 UBE3CQ15386 1083 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 ADRM1Q16186 407 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 MAN2A1Q16706 1144 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 TCTN3Q6NUS6 607 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 ABHD15Q6UXT9 468 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 TAS1R1Q7RTX1 841 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 TAX1BP1Q86VP1 789 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 LILRA3Q8N6C8 439 aaPredicted RBP5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 ANKRD53Q8N9V6 530 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 AUTS2Q8WXX7 1259 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 JADE3Q92613 823 aa5.3□□□□□ -1.56
HERPUD1-212ENST00000567944 RABGGTAQ92696 567 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms