RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 NT5C3AQ9H0P0 336 aa15.34■□□□□ 0.05
HERPUD1-210ENST00000565966 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-210ENST00000565966 BHMT2Q9H2M3 363 aa15.34■□□□□ 0.05
HERPUD1-210ENST00000565966 MINDY3Q9H8M7 445 aa15.34■□□□□ 0.05
HERPUD1-210ENST00000565966 DNM3Q9UQ16 869 aa15.34■□□□□ 0.05
HERPUD1-210ENST00000565966 RWDD3Q9Y3V2 267 aa15.34■□□□□ 0.05
HERPUD1-210ENST00000565966 SPTLC2O15270 562 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 LPXNO60711 386 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 EOMESO95936 686 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 UBA7P41226 1012 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 DNM1Q05193 864 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 CAPSQ13938 189 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 SPECC1Q5M775 1068 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 FAM102BQ5T8I3 360 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 ATL3Q6DD88 541 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 TWF2Q6IBS0 349 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 USP49Q70CQ1 688 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 ECHDC2Q86YB7 292 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 TRAIPQ9BWF2 469 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 NFKBIZQ9BYH8 718 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 AGPAT5Q9NUQ2 364 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 LMCD1Q9NZU5 365 aa15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 PIN4Q9Y237 131 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-210ENST00000565966 EYSQ5T1H1 3165 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 HOXA2O43364 376 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 PPP6R2O75170 966 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 RB1P06400 928 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 SKIP12755 728 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 DDIT3P35638 169 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 BMPR1AP36894 532 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 PAN2Q504Q3 1202 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 GDPD5Q8WTR4 605 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 CALML4Q96GE6 196 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 EPSTI1Q96J88 318 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 CCSER1Q9C0I3 900 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 GPRC5CQ9NQ84 441 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 MTCH2Q9Y6C9 303 aa15.32■□□□□ 0.04
HERPUD1-210ENST00000565966 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 C5orf67F2Z3F1 127 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 H3BNC9 293 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 INO80B-WBP1J3KQ70 363 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 ERLIN2O94905 339 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 LINC00271P0C7V0 271 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 AXLP30530 894 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 CTNNB1P35222 781 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 GATMP50440 423 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 GPM6BQ13491 265 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 KARSQ15046 597 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 ZNF598Q86UK7 904 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 LRRC15Q8TF66 581 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 SYMPKQ92797 1274 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-210ENST00000565966 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 ZNF623O75123 536 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 FGFR1P11362 822 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 PLCG1P19174 1290 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 RAB27AP51159 221 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 MBTD1Q05BQ5 628 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 CCDC85BQ15834 202 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 RINT1Q6NUQ1 792 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 C1orf186Q6ZWK4 172 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 SYT2Q8N9I0 419 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 RNF169Q8NCN4 708 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 PRUNE2Q8WUY3 3088 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 CHAMP1Q96JM3 812 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 RUSC1Q9BVN2 902 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 PLXNA4Q9HCM2 1894 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 POLD4Q9HCU8 107 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 BLOC1S4Q9NUP1 217 aa15.3■□□□□ 0.04
HERPUD1-210ENST00000565966 TDRD15B5MCY1 1934 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 CUTAO60888 179 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 SSBP05455 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 PLA2G4BP0C869 781 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 ATF7P17544 494 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 NAMPTP43490 491 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 SLC12A3P55017 1021 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 NAALADL2Q58DX5 795 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 ZBTB8OSQ8IWT0 167 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 RASSF8Q8NHQ8 419 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 KCNG4Q8TDN1 519 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 BSNDQ8WZ55 320 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 P2RX5Q93086 422 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 IFT74Q96LB3 600 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 CASD1Q96PB1 797 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 C11orf84Q9BUA3 381 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
HERPUD1-210ENST00000565966 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms