RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CCDC152Q4G0S7 254 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 DACT2Q5SW24 774 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 ANO1Q5XXA6 986 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 NAIF1Q69YI7 327 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 SWSAP1Q6NVH7 229 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 C16orf46Q6P387 395 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 MMS22LQ6ZRQ5 1243 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TTLL7Q6ZT98 887 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 LINC00469Q8N7U9 141 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 ZBTB38Q8NAP3 1195 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 OR8H1Q8NGG4 311 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TTC8Q8TAM2 541 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 FAM76AQ8TAV0 307 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 GOLGA5Q8TBA6 731 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 DDX54Q8TDD1 881 aaKnown RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 GPR152Q8TDT2 470 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 UBASH3BQ8TF42 649 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 STK32AQ8WU08 396 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 MRPS27Q92552 414 aaKnown RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 OSBP2Q969R2 916 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 C8orf76Q96K31 380 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 PPP1R13BQ96KQ4 1090 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TCEANC2Q96MN5 208 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 USP28Q96RU2 1077 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 SEC62Q99442 399 aaKnown RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TAOK3Q9H2K8 898 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 GOLPH3LQ9H4A5 285 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 PICK1Q9NRD5 415 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 ARGLU1Q9NWB6 273 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-214ENST00000565274 ZNF446Q9NWS9 450 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 SAGE1Q9NXZ1 904 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 CNTN3Q9P232 1028 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 TUBE1Q9UJT0 475 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 FAM184BQ9ULE4 1060 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 PCDHA7Q9UN72 937 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 JRKLQ9Y4A0 524 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 NEDD4P46934 1319 aa5.66□□□□□ -1.5
CAPN3-214ENST00000565274 DDX60Q8IY21 1712 aaKnown RBP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 STRCQ7RTU9 1775 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 GOLGA6L10A0A0M3HER8 536 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 FAM221BA6H8Z2 402 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 TRIM64A6NGJ6 449 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 TRIM64BA6NI03 449 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 ERVV-1B6SEH8 477 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 KLHL41O60662 606 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 PPP6R2O75170 966 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 STAM2O75886 525 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 APBB3O95704 486 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 POU3F3P20264 500 aaPredicted RBP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 LIFRP42702 1097 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 MXI1P50539 228 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 PEX5P50542 639 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 ARID5AQ03989 594 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 APOBRQ0VD83 1088 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 STK3Q13188 491 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 SP140Q13342 867 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 HLTFQ14527 1009 aaKnown RBP eCLIP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 KIF22Q14807 665 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 SLC39A14Q15043 492 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 KIAA0753Q2KHM9 967 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 CCDC57Q2TAC2 916 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 LRRC24Q50LG9 513 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 MUM1L1Q5H9M0 696 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 RNF43Q68DV7 783 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 TTLL5Q6EMB2 1281 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 MZT2AQ6P582 158 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 CAPN12Q6ZSI9 719 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 ARHGEF18Q6ZSZ5 1173 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 ARHGAP27Q6ZUM4 889 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 SGMS1Q86VZ5 419 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 DGKHQ86XP1 1220 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 LRRC43Q8N309 656 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 AOPEPQ8N6M6 819 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 VGLL2Q8N8G2 317 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 NCOA7Q8NI08 942 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 STON2Q8WXE9 905 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 ARHGEF2Q92974 986 aaKnown RBP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 KLHDC7BQ96G42 594 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 TSGA13Q96PP4 275 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 TRIM8Q9BZR9 551 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 CYP4F11Q9HBI6 524 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 TOMM22Q9NS69 142 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 HERC5Q9UII4 1024 aaKnown RBP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 HPSEQ9Y251 543 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 SSX2IPQ9Y2D8 614 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 LUC7L2Q9Y383 392 aaKnown RBP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 SPO11Q9Y5K1 396 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.65□□□□□ -1.5
CAPN3-214ENST00000565274 FHOD1Q9Y613 1164 aa5.65□□□□□ -1.5
CAPN3-214ENST00000565274 STK36Q9NRP7 1315 aa5.65□□□□□ -1.51
CAPN3-214ENST00000565274 TJP1Q07157 1748 aa5.65□□□□□ -1.51
CAPN3-214ENST00000565274 RGPD5Q99666 1765 aa5.65□□□□□ -1.51
CAPN3-214ENST00000565274 LAMA4Q16363 1823 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 COL5A2P05997 1499 aaPredicted RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 M0R2C6 588 aa5.64□□□□□ -1.51
CAPN3-214ENST00000565274 RTCAO00442 366 aaKnown RBP5.64□□□□□ -1.51
CAPN3-214ENST00000565274 SNUPNO95149 360 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms