RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 RECQLP46063 649 aaPredicted RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 STX19Q8N4C7 294 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 PGM2Q96G03 612 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 BLZF1Q9H2G9 400 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 RBM12Q9NTZ6 932 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 SAMD9LQ8IVG5 1584 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 ARPC4-TTLL3A0A0A6YYG9 625 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 CCDC189A1A4V9 331 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 VAV1P15498 845 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 PMS1P54277 932 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 STK4Q13043 487 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 APOA5Q6Q788 366 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 CCDC125Q86Z20 511 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 PLD3Q8IV08 490 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 USP38Q8NB14 1042 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 AP1M1Q9BXS5 423 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 PHF2O75151 1096 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 S100A9P06702 114 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 CCNE1P24864 410 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 ARL6IP4Q66PJ3 421 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 MIGA2Q7L4E1 593 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 TAS2R42Q7RTR8 314 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 KRT25Q7Z3Z0 450 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 NME9Q86XW9 330 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 ITPKCQ96DU7 683 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 TSSK1BQ9BXA7 367 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 COPG2Q9UBF2 871 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 RABL2AQ9UBK7 228 aaPredicted RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 WDR7Q9Y4E6 1490 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 DPPA5A6NC42 116 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 CYP27A1Q02318 531 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 ATP1A4Q13733 1029 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 TTC27Q6P3X3 843 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 KCNV1Q6PIU1 500 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 IQCF2Q8IXL9 164 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 BEST2Q8NFU1 509 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 WDR12Q9GZL7 423 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 DDX18Q9NVP1 670 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 TTC7AQ9ULT0 858 aaPredicted RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 SNTNA6NMZ2 147 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 COPEO14579 308 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 CDK7P50613 346 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 TTC33Q6PID6 262 aaPredicted RBP6.65□□□□□ -1.35
CLK3-212ENST00000563418 SNX25Q9H3E2 840 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 ITM2BQ9Y287 266 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 SH3TC1Q8TE82 1336 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 G3V3G9 751 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 FOSL1P15407 271 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 CDC27P30260 824 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 DCAF8Q5TAQ9 597 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 JADE1Q6IE81 842 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 CYFIP1Q7L576 1253 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 NDST4Q9H3R1 872 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 SELENONQ9NZV5 590 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 ABCA9Q8IUA7 1624 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 ZNF608Q9ULD9 1512 aaPredicted RBP6.65□□□□□ -1.35
CLK3-212ENST00000563418 BCL10O95999 233 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 ATP6V1B1P15313 513 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 IL10P22301 178 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 GJC1P36383 396 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 NAPAP54920 295 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 EIF2B5Q13144 721 aaKnown RBP6.65□□□□□ -1.35
CLK3-212ENST00000563418 INPP5AQ14642 412 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 NECTIN1Q15223 517 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 ADSSL1Q8N142 457 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 USHBP1Q8N6Y0 703 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 HAUS7Q99871 368 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 APOL4Q9BPW4 351 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 DISC1Q9NRI5 854 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 ABCF3Q9NUQ8 709 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 MAGI2Q86UL8 1455 aa6.65□□□□□ -1.35
CLK3-212ENST00000563418 RNF103-CHMP3A0A140T963 221 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 DNALI1O14645 258 aaPredicted RBP6.64□□□□□ -1.35
CLK3-212ENST00000563418 PPP1R15BQ5SWA1 713 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 RINT1Q6NUQ1 792 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 UHMK1Q8TAS1 419 aaKnown RBP6.64□□□□□ -1.35
CLK3-212ENST00000563418 BTBD10Q9BSF8 475 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 MKNK2Q9HBH9 465 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 MTMR7Q9Y216 660 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 WDR17Q8IZU2 1322 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 PCDH11XQ9BZA7 1347 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 PDIA5Q14554 519 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 KIAA1755Q5JYT7 1200 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 ADD3Q9UEY8 706 aaKnown RBP6.64□□□□□ -1.35
CLK3-212ENST00000563418 TRIM64CA6NLI5 447 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 BAIAP3O94812 1187 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 PSMG1O95456 288 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 PTGS2P35354 604 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 RASA3Q14644 834 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 RPS6KA2Q15349 733 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 TSGA10IPQ3SY00 556 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 KLHL12Q53G59 568 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 RNF207Q6ZRF8 634 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 RMND5BQ96G75 393 aaPredicted RBP6.64□□□□□ -1.35
CLK3-212ENST00000563418 ZFYVE19Q96K21 471 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 STK36Q9NRP7 1315 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 SYNPO2Q9UMS6 1093 aa6.64□□□□□ -1.35
CLK3-212ENST00000563418 POGZQ7Z3K3 1410 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms