RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 DDX19AQ9NUU7 478 aaKnown RBP9.41□□□□□ -0.9
TPM1-213ENST00000558400 ADGRA3Q8IWK6 1321 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 TTC3P53804 2025 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 A0A087WWV3 80 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 C5orf67F2Z3F1 127 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 MGEA5O60502 916 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 USO1O60763 962 aaKnown RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 CSDE1O75534 798 aaKnown RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 ERLIN2O94905 339 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 PTPROQ16827 1216 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 EPC2Q52LR7 807 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 HYIQ5T013 277 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 FAM102BQ5T8I3 360 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 TWF2Q6IBS0 349 aaKnown RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 ALYREFQ86V81 257 aaKnown RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 ECHDC2Q86YB7 292 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 ABI1Q8IZP0 508 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 PGBD4Q96DM1 585 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 CCDC51Q96ER9 411 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 IFT74Q96LB3 600 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 ZNF396Q96N95 335 aaPredicted RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 C11orf84Q9BUA3 381 aaPredicted RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 TMEM117Q9H0C3 514 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 C2orf40Q9H1Z8 148 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 BHMT2Q9H2M3 363 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 CERS4Q9HA82 394 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 C17orf75Q9HAS0 396 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 KCND2Q9NZV8 630 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 MTMR6Q9Y217 621 aa9.4□□□□□ -0.9
TPM1-213ENST00000558400 MORC2Q9Y6X9 1032 aaPredicted RBP9.4□□□□□ -0.9
TPM1-213ENST00000558400 PHLPP2Q6ZVD8 1323 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 H3BNC9 293 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 INO80B-WBP1J3KQ70 363 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 GLRA2P23416 452 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 CDC25AP30304 524 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 EFNA5P52803 228 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 RESTQ13127 1097 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 GPM6BQ13491 265 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 SLC39A14Q15043 492 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 ECM1Q16610 540 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 ATL3Q6DD88 541 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 NOTUMQ6P988 496 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 MAEAQ7L5Y9 396 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 ZBTB8OSQ8IWT0 167 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 PPM1EQ8WY54 764 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 P2RX5Q93086 422 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 MS4A3Q96HJ5 214 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 PRIMPOLQ96LW4 560 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 NECAB3Q96P71 396 aaPredicted RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 MMTAG2Q9BU76 263 aaKnown RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 LMAN2LQ9H0V9 348 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 POLR3FQ9H1D9 316 aaPredicted RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 RC3H2Q9HBD1 1191 aaKnown RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 UBN1Q9NPG3 1134 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 AGPAT5Q9NUQ2 364 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 KANSL3Q9P2N6 904 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 CCDC39Q9UFE4 941 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 PIN4Q9Y237 131 aaKnown RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 RBM19Q9Y4C8 960 aaKnown RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 PCDHB12Q9Y5F1 795 aa9.39□□□□□ -0.91
TPM1-213ENST00000558400 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
TPM1-213ENST00000558400 LRRIQ4A6NIV6 560 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 TBKBP1A7MCY6 615 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 E9PMD0 336 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 ARHGEF15O94989 841 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 FGFR4P22455 802 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 HOXA11P31270 313 aaPredicted RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 TXLNAP40222 546 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 NAMPTP43490 491 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 GRB10Q13322 594 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 CAPSQ13938 189 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 BECN1Q14457 450 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 ZRSR1Q15695 479 aaKnown RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 MAPK6Q16659 721 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 FAM187BQ17R55 369 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 RINT1Q6NUQ1 792 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 MRPL10Q7Z7H8 261 aaKnown RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 ZNF598Q86UK7 904 aaKnown RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 CABP7Q86V35 215 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 SYT2Q8N9I0 419 aaPredicted RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 DEPTORQ8TB45 409 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 MRPL38Q96DV4 380 aaKnown RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 DRC1Q96MC2 740 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 NTPCRQ9BSD7 190 aaKnown RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 C17orf80Q9BSJ5 609 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 CCSER1Q9C0I3 900 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 MINDY3Q9H8M7 445 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 FAM105AQ9NUU6 356 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 PRMT7Q9NVM4 692 aaPredicted RBP9.38□□□□□ -0.91
TPM1-213ENST00000558400 MTUS1Q9ULD2 1270 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 CLIC4Q9Y696 253 aa9.38□□□□□ -0.91
TPM1-213ENST00000558400 MTCH2Q9Y6C9 303 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms