RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 HCSTQ9UBK5 93 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 C5orf42Q9H799 3197 aa9.8□□□□□ -0.84
SNRPA1-206ENST00000558059 ASAP2O43150 1006 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 GAS2O43903 313 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 MED24O75448 989 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 ITGB1P05556 798 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 OR52Z1P0C646 297 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 SRGAP2CP0DJJ0 459 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 XRCC6P12956 609 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 SFPQP23246 707 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 DNAJB1P25685 340 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TECP42680 631 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 MCM2P49736 904 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 RARRES1P49788 294 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 KCNQ1P51787 676 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 AAK1Q2M2I8 961 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TIGD5Q53EQ6 642 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 NAALADL2Q58DX5 795 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TCEAL5Q5H9L2 206 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 CLLU1OSQ5K130 101 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 LRRC55Q6ZSA7 311 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 SRGAP1Q7Z6B7 1085 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 FERMT3Q86UX7 667 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 CATSPER3Q86XQ3 398 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 KLHL23Q8NBE8 558 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 PIGOQ8TEQ8 1089 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TCP11Q8WWU5 503 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 MTRQ99707 1265 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 POLR3CQ9BUI4 534 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TRAIPQ9BWF2 469 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TMEM117Q9H0C3 514 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 NSUN3Q9H649 340 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 CWH43Q9H720 699 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 MINDY3Q9H8M7 445 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TUFT1Q9NNX1 390 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 TYW1Q9NV66 732 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 DACT1Q9NYF0 836 aa9.79□□□□□ -0.84
SNRPA1-206ENST00000558059 HOXA2O43364 376 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 ZNF623O75123 536 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 DGAT1O75907 488 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 EOMESO95936 686 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 GJB2P29033 226 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 ARL2P36404 184 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 PHKA2P46019 1235 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 CATSPER4Q7RTX7 472 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 RNF149Q8NC42 400 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 ASAP3Q8TDY4 903 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 ADAMTS19Q8TE59 1207 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 BACH2Q9BYV9 841 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 UBE2ZQ9H832 354 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 NOL7Q9UMY1 257 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 KIF3AQ9Y496 699 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 PCDHB6Q9Y5E3 794 aa9.78□□□□□ -0.84
SNRPA1-206ENST00000558059 GLRA2P23416 452 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 RPA1P27694 616 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 HOXA11P31270 313 aaPredicted RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 PTENP60484 403 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 POU5F1BQ06416 359 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 HYAL1Q12794 435 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 PTGDRQ13258 359 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 MXD4Q14582 209 aaPredicted RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 ECM1Q16610 540 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 CTC1Q2NKJ3 1217 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 SPOUT1Q5T280 376 aaKnown RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 TWF2Q6IBS0 349 aaKnown RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 RNF169Q8NCN4 708 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 HELQQ8TDG4 1101 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 POF1BQ8WVV4 589 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 NECAB3Q96P71 396 aaPredicted RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 NACC1Q96RE7 527 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 AAASQ9NRG9 546 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 AGPAT5Q9NUQ2 364 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 FAM105AQ9NUU6 356 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 DBR1Q9UK59 544 aaKnown RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 PCDHB12Q9Y5F1 795 aa9.77□□□□□ -0.85
SNRPA1-206ENST00000558059 MEIS3P2A8K0S8 358 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 USO1O60763 962 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 FGF18O76093 207 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 LAG3P18627 525 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 MUTP22033 750 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 KCNA5P22460 613 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 IRS1P35568 1242 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 LTBRP36941 435 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 CAPSQ13938 189 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 PDIA5Q14554 519 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 IL17AQ16552 155 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 LEXMQ3ZCV2 418 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 UBXN11Q5T124 520 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 MRPL10Q7Z7H8 261 aaKnown RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 IGSF22Q8N9C0 903 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 ERMNQ8TAM6 284 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 LPPQ93052 612 aa9.76□□□□□ -0.85
SNRPA1-206ENST00000558059 RNF25Q96BH1 459 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms