RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 DDX50Q9BQ39 737 aaKnown RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 KIFC1Q9BW19 673 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PKD2L1Q9P0L9 805 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CDY2AQ9Y6F7 541 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CDY1Q9Y6F8 540 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 POLR3AO14802 1390 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 ASNA1O43681 348 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PPP6R2O75170 966 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PGM1P36871 562 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 KCNQ4P56696 695 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 XKR9Q5GH70 373 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 LRRC59Q96AG4 307 aaKnown RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 IFT43Q96FT9 208 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 DESI2Q9BSY9 194 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 FIS1Q9Y3D6 152 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PFKFB1P16118 471 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 RPAP3Q9H6T3 665 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PNMA6AP0CW24 399 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 ARFIP2P53365 341 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 C20orf194Q5TEA3 1177 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PPP4R4Q6NUP7 873 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 DYMQ7RTS9 669 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 RIN3Q8TB24 985 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PIK3R5Q8WYR1 880 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 ACCSQ96QU6 501 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CTNNAL1Q9UBT7 734 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CCDC36Q8IYA8 594 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 CSADQ9Y600 493 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
SYNE3-205ENST00000557275 LONRF3Q496Y0 759 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 PLAAQ9Y263 795 aa9.35□□□□□ -0.91
SYNE3-205ENST00000557275 LRRIQ4A6NIV6 560 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SNPHO15079 494 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 ADAM21Q9UKJ8 722 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 NESP48681 1621 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 MTHFD1LQ6UB35 978 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 ASZ1Q8WWH4 475 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 PIK3R1P27986 724 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 USP39Q53GS9 565 aaKnown RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 MEIS3Q99687 375 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 ALBP02768 609 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 P3H1Q32P28 736 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 RFT1Q96AA3 541 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 B4E1Z4 1266 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 FNTAP49354 379 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CCDC80Q76M96 950 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 PEG10Q86TG7 708 aaKnown RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SGSM3Q96HU1 749 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CCT7Q99832 543 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 ASNSD1Q9NWL6 643 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 PIK3C2GO75747 1445 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CHMP1BQ7LBR1 199 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 FAF2Q96CS3 445 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CEP44Q9C0F1 390 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 VSNL1P62760 191 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CYP4A11Q02928 519 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CUL4AQ13619 759 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CYP4A22Q5TCH4 519 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 LVRNQ6Q4G3 990 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CYGBQ8WWM9 190 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CATSPER2Q96P56 530 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.34□□□□□ -0.915e-7■■■□□ 15
SYNE3-205ENST00000557275 CD109Q6YHK3 1445 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 MOCS3O95396 460 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 BNC1Q01954 994 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SHROOM1Q2M3G4 852 aaPredicted RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 ZNF568Q3ZCX4 644 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 RINLQ6ZS11 566 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 GPR141Q7Z602 305 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SLC35F6Q8N357 371 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 ENKURQ8TC29 256 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SPRTNQ9H040 489 aaPredicted RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SLITRK6Q9H5Y7 841 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 IRS4O14654 1257 aaPredicted RBP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 RASA1P20936 1047 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SLC9A5Q14940 896 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 TSHZ3Q63HK5 1081 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 SGSM2O43147 1006 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 STX11O75558 287 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 PDE5AO76074 875 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CFBP00751 764 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 RAB2AP61019 212 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 STX12Q86Y82 276 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 CNBD1Q8NA66 436 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 TRIM51Q9BSJ1 452 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 FTOQ9C0B1 505 aaKnown RBP eCLIP9.34□□□□□ -0.91
SYNE3-205ENST00000557275 AURKCQ9UQB9 309 aa9.34□□□□□ -0.91
SYNE3-205ENST00000557275 KPNA4O00629 521 aaPredicted RBP9.34□□□□□ -0.92
SYNE3-205ENST00000557275 PKN3Q6P5Z2 889 aa9.34□□□□□ -0.92
SYNE3-205ENST00000557275 NELFCDQ8IXH7 590 aa9.34□□□□□ -0.92
SYNE3-205ENST00000557275 GGA1Q9UJY5 639 aa9.34□□□□□ -0.92
SYNE3-205ENST00000557275 STAP1Q9ULZ2 295 aa9.34□□□□□ -0.92
SYNE3-205ENST00000557275 NOVA2Q9UNW9 492 aaKnown RBP9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms