RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SCFD1Q8WVM8 642 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 NLRP7Q8WX94 980 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 KCNN1Q92952 543 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 HPS3Q969F9 1004 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 BICD1Q96G01 975 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 NFKBIZQ9BYH8 718 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 TYW1Q9NV66 732 aaKnown RBP10.13□□□□□ -0.79
ACTN1-218ENST00000556343 TBX20Q9UMR3 447 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 CEP350Q5VT06 3117 aa10.13□□□□□ -0.79
ACTN1-218ENST00000556343 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 A0A1W2PQ45 241 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 A0A1W2PQY0 241 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 ARVCFO00192 962 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 KIAA0391O15091 583 aaKnown RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 TREHO43280 583 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 PRKCSHP14314 528 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 CD44P16070 742 aaKnown RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 HOXC8P31273 242 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 SOX10P56693 466 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 PTENP60484 403 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 PTK7Q13308 1070 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 CAPSQ13938 189 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 IQCB1Q15051 598 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 MARCH8Q5T0T0 291 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 SLFN12LQ6IEE8 588 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 GAS2L3Q86XJ1 694 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 KIAA0319LQ8IZA0 1049 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 CSGALNACT2Q8N6G5 542 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 LINC01465Q8N7H1 131 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 U2AF1L4Q8WU68 220 aaKnown RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 NLRP4Q96MN2 994 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 CEP63Q96MT8 703 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 MRPL4Q9BYD3 311 aaKnown RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 FAM49AQ9H0Q0 323 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 RBSNQ9H1K0 784 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 THAP9Q9H5L6 903 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 PRMT7Q9NVM4 692 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-218ENST00000556343 ARHGAP28Q9P2N2 729 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 TRAF3IP3Q9Y228 551 aa10.12□□□□□ -0.79
ACTN1-218ENST00000556343 DOCK5Q9H7D0 1870 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 INO80B-WBP1J3KQ70 363 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 CAND2O75155 1236 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 PPP1R37O75864 691 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 VTNP04004 478 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 TPM3P06753 285 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 GJA8P48165 433 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 LIG4P49917 911 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 GPC3P51654 580 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 NLRP11P59045 1033 aaKnown RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 ADAM17P78536 824 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 MKRN4PQ13434 485 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 ADAM9Q13443 819 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 BFSP2Q13515 415 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 NFIL3Q16649 462 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 ZC2HC1CQ53FD0 456 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 CDCA2Q69YH5 1023 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 ANKRD40Q6AI12 368 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 GDF6Q6KF10 455 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 FILIP1Q7Z7B0 1213 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 LUZP1Q86V48 1076 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 IFNLR1Q8IU57 520 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 MAP4K3Q8IVH8 894 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 BSNDQ8WZ55 320 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 PRIMPOLQ96LW4 560 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 CTAGE1Q96RT6 745 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 FIZ1Q96SL8 496 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 STRA6Q9BX79 667 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 SENP6Q9GZR1 1112 aaPredicted RBP10.11□□□□□ -0.79
ACTN1-218ENST00000556343 FRMD4BQ9Y2L6 1034 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
ACTN1-218ENST00000556343 A0A087WZ62 844 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 HNRNPDLO14979 420 aaKnown RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 CBFA2T2O43439 604 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 ERLIN2O94905 339 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 LDHAP00338 332 aaKnown RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 PRKCBP05771 671 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 SFPQP23246 707 aaKnown RBP eCLIP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 CASP5P51878 434 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 CRYBB1P53674 252 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 DRP2Q13474 957 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 PRPF4BQ13523 1007 aaKnown RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 FILIP1LQ4L180 1135 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 ARMCX5Q6P1M9 558 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 ZPBP2Q6X784 338 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 FAM43BQ6ZT52 329 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 USP37Q86T82 979 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 SERINC5Q86VE9 423 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 DHX40Q8IX18 779 aaKnown RBP10.1□□□□□ -0.79
ACTN1-218ENST00000556343 SLC43A3Q8NBI5 491 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 DNAJB3Q8WWF6 145 aa10.1□□□□□ -0.79
ACTN1-218ENST00000556343 FDXACB1Q9BRP7 624 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms