RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 PCDHGA8Q9Y5G5 932 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCDHGA7Q9Y5G6 932 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCDHGA6Q9Y5G7 932 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCDHGA3Q9Y5H0 932 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 PCDHGA2Q9Y5H1 932 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 GPR45Q9Y5Y3 372 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 CDY2AQ9Y6F7 541 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 MAGI3Q5TCQ9 1506 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 ABCC2Q92887 1545 aa4.49□□□□□ -1.69
SRP54-209ENST00000555746 ZNF335Q9H4Z2 1342 aaPredicted RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 ARAP3Q8WWN8 1544 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 A0A0A6YYK5 440 aaPredicted RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 AKAP10O43572 662 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 NRP2O60462 931 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 C8AP07357 584 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 ADCY8P40145 1251 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 RECQLP46063 649 aaPredicted RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 SLC5A3P53794 718 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 LGALS4P56470 323 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 SRSF2Q01130 221 aaKnown RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 PIN1Q13526 163 aaPredicted RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 SPIDRQ14159 915 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 ZNF827Q17R98 1081 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 TOR2AQ5JU69 321 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 OTOP2Q7RTS6 562 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 IFNL2Q8IZJ0 200 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 KLHL36Q8N4N3 616 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 ADAMTS17Q8TE56 1095 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 TSPEARQ8WU66 669 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 HOOK2Q96ED9 719 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 SPATA25Q9BR10 227 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 SOX7Q9BT81 388 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 QRSL1Q9H0R6 528 aaKnown RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 TMEM168Q9H0V1 697 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 CDH19Q9H159 772 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.48□□□□□ -1.69
SRP54-209ENST00000555746 EVLQ9UI08 416 aaPredicted RBP4.48□□□□□ -1.69
SRP54-209ENST00000555746 ADAM29Q9UKF5 820 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 SYNPO2Q9UMS6 1093 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 EDARQ9UNE0 448 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 MRFAP1Q9Y605 127 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 EID1Q9Y6B2 187 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 SETBP1Q9Y6X0 1596 aa4.48□□□□□ -1.69
SRP54-209ENST00000555746 A0A1B0GTL3 188 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 KLHL33A6NCF5 533 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 CSF2RBP32927 897 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 RAB27AP51159 221 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 SESN2P58004 480 aaPredicted RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 PPARAQ07869 468 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 ODF1Q14990 250 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 TCERG1LQ5VWI1 586 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 MBNL2Q5VZF2 373 aaKnown RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 CIAPIN1Q6FI81 312 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 ZNF761Q86XN6 746 aaPredicted RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 RAVER1Q8IY67 606 aaKnown RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 ADGRG2Q8IZP9 1017 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 CPA6Q8N4T0 437 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 TXNDC5Q8NBS9 432 aaKnown RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 JADE3Q92613 823 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 MBD6Q96DN6 1003 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 DYDC2Q96IM9 177 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 FDXACB1Q9BRP7 624 aaPredicted RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 IFT122Q9HBG6 1241 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 DPP7Q9UHL4 492 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 USP18Q9UMW8 372 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 G3BP2Q9UN86 482 aaKnown RBP4.47□□□□□ -1.69
SRP54-209ENST00000555746 TTC37Q6PGP7 1564 aa4.47□□□□□ -1.69
SRP54-209ENST00000555746 WIZO95785 1651 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 NUAK1O60285 661 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 RFPL1O75677 317 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 SNUPNO95149 360 aaKnown RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 PARNO95453 639 aaKnown RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 HMGCRP04035 888 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 CYP1A1P04798 512 aaPredicted RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 CCND1P24385 295 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 KCNQ1P51787 676 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 SLURP1P55000 103 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 NRG3P56975 720 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 ZNF124Q15973 351 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 MAN2A1Q16706 1144 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 MCTP2Q6DN12 878 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 KLHDC10Q6PID8 442 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 LARP4Q71RC2 724 aaKnown RBP eCLIP4.46□□□□□ -1.7
SRP54-209ENST00000555746 GAREM2Q75VX8 874 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 PNMA8AQ86V59 439 aaPredicted RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 C1QL4Q86Z23 238 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 GLB1L2Q8IW92 636 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 CMTR2Q8IYT2 770 aaKnown RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 LPPQ93052 612 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 FATE1Q969F0 183 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 PAWRQ96IZ0 340 aaKnown RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 TEKT5Q96M29 485 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 WDR92Q96MX6 357 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 CARD11Q9BXL7 1154 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 RTFDC1Q9BY42 306 aaPredicted RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 RHOBTB2Q9BYZ6 727 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 BARX1Q9HBU1 254 aaPredicted RBP4.46□□□□□ -1.7
SRP54-209ENST00000555746 AASDHPPTQ9NRN7 309 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 SCOCQ9UIL1 159 aa4.46□□□□□ -1.7
SRP54-209ENST00000555746 CDC42EP3Q9UKI2 254 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms