RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 MED24O75448 989 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 CALRP27797 417 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 STAT1P42224 750 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 PDE6CP51160 858 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 KLRC3Q07444 240 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 RBBP5Q15291 538 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 SMAD1Q15797 465 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 SLC30A9Q6PML9 568 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 ECHDC2Q86YB7 292 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 HAUS1Q96CS2 278 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 KLHL14Q9P2G3 628 aa9.57□□□□□ -0.88
SYNE2-217ENST00000555022 MTRF1LQ9UGC7 380 aaKnown RBP9.57□□□□□ -0.88
SYNE2-217ENST00000555022 MYH4Q9Y623 1939 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-217ENST00000555022 M0R2N6 131 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 SNUPNO95149 360 aaKnown RBP9.56□□□□□ -0.88
SYNE2-217ENST00000555022 CETPP11597 493 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 MMP13P45452 471 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 IFI16Q16666 785 aaKnown RBP9.56□□□□□ -0.88
SYNE2-217ENST00000555022 PHC3Q8NDX5 983 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 SH3GL3Q99963 347 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 CUEDC2Q9H467 287 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 ALG6Q9Y672 507 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 DISP2A7MBM2 1401 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 PPFIA2O75334 1257 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 PYGMP11217 842 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 NEFHP12036 1026 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 CALCOCO2Q13137 446 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 RCN2Q14257 317 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 PPP1R15BQ5SWA1 713 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-217ENST00000555022 PIGWQ7Z7B1 504 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 PRELID2Q8N945 189 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 UTP4Q969X6 686 aaKnown RBP9.56□□□□□ -0.88
SYNE2-217ENST00000555022 DYDC2Q96IM9 177 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 AK8Q96MA6 479 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 TRIM7Q9C029 511 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 KIAA1683Q9H0B3 1180 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 NT5C3AQ9H0P0 336 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 BHMT2Q9H2M3 363 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 MYO3BQ8WXR4 1341 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 NID2Q14112 1375 aa9.56□□□□□ -0.88
SYNE2-217ENST00000555022 LRRD1A4D1F6 860 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 USP17L10C9JJH3 530 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 DDX39AO00148 427 aaKnown RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RIPK2O43353 540 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 BANF1O75531 89 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 HOXA13P31271 388 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 FOXN2P32314 431 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 PSMC4P43686 418 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 MAPK7Q13164 816 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 ANO7Q6IWH7 933 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RUBCNQ92622 972 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 REEP2Q9BRK0 252 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 PITPNM3Q9BZ71 974 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 PAPOLBQ9NRJ5 636 aaKnown RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 ZDHHC18Q9NUE0 388 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 GRHL1Q9NZI5 618 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 LRP6O75581 1613 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 CCDC188H7C350 402 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 NR3C1P04150 777 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 GYS1P13807 737 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RASA1P20936 1047 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 COMTP21964 271 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RCAN1P53805 252 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 SLC8A3P57103 927 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 DPP8Q6V1X1 898 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 CCNJLQ8IV13 435 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 CYP2W1Q8TAV3 490 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RAB34Q9BZG1 259 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 TRIM4Q9C037 500 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 SLITRK6Q9H5Y7 841 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 BTG4Q9NY30 223 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RASAL2Q9UJF2 1139 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 ZBTB21Q9ULJ3 1066 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 GOLGA8IPA6NC78 632 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 GOLGA8JA6NMD2 632 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 RBAK-RBAKDNI3L0D1 243 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 FTLP02792 175 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 GHRP10912 638 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 CYP11B2P19099 503 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 DUPD1Q68J44 220 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 HAS1Q92839 578 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 ACSF2Q96CM8 615 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-217ENST00000555022 IFT74Q96LB3 600 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 NPHS2Q9NP85 383 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 HOMER3Q9NSC5 361 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 ETAA1Q9NY74 926 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 NKIRAS1Q9NYS0 192 aa9.55□□□□□ -0.88
SYNE2-217ENST00000555022 PVALEFA0A1B0GWK0 134 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 KRT36O76013 467 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 MYL1P05976 194 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 LDHBP07195 334 aaKnown RBP9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CCND1P24385 295 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CDK8P49336 464 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 SEMA3FQ13275 785 aa9.54□□□□□ -0.88
SYNE2-217ENST00000555022 CBWD6Q4V339 395 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms