RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 USP28Q96RU2 1077 aa15.69■□□□□ 0.1
SPTLC2-202ENST00000554365 NGRNQ9NPE2 291 aaKnown RBP15.69■□□□□ 0.1
SPTLC2-202ENST00000554365 RNF19AQ9NV58 838 aa15.69■□□□□ 0.1
SPTLC2-202ENST00000554365 BAG4O95429 457 aaKnown RBP15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 CA8P35219 290 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 TCF15Q12870 199 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 KCNC3Q14003 757 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 SYCE2Q6PIF2 218 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 ASIC4Q96FT7 647 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 ADAMTS10Q9H324 1103 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 SPG21Q9NZD8 308 aa15.68■□□□□ 0.1
SPTLC2-202ENST00000554365 WDR64B1ANS9 1081 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 FGFR4P22455 802 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 EIF4BP23588 611 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 TRAPPC10P48553 1259 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 VCPP55072 806 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 RILPL1Q5EBL4 403 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 NRBP2Q9NSY0 501 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 FAM86C1Q9NVL1 165 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 TFIP11Q9UBB9 837 aaKnown RBP15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 CDH22Q9UJ99 828 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 PCDHB6Q9Y5E3 794 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 CLIC4Q9Y696 253 aa15.67■□□□□ 0.1
SPTLC2-202ENST00000554365 CHMP2AO43633 222 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 ZNF862O60290 1169 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 OATP04181 439 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 HOXB8P17481 243 aaPredicted RBP15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 NASPP49321 788 aaPredicted RBP15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 PRKCEQ02156 737 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 SMC1AQ14683 1233 aaKnown RBP15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 PTPAQ15257 358 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 CLLU1OSQ5K130 101 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 TTC38Q5R3I4 469 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 ATL3Q6DD88 541 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 NEK8Q86SG6 692 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 LINC01465Q8N7H1 131 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 HELQQ8TDG4 1101 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 NLRP7Q8WX94 980 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 CASP10Q92851 521 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 MBOAT7Q96N66 472 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 ZNF396Q96N95 335 aaPredicted RBP15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 DISC1Q9NRI5 854 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 NOL7Q9UMY1 257 aaKnown RBP15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 NR2E1Q9Y466 385 aa15.66■□□□□ 0.1
SPTLC2-202ENST00000554365 NT5C1B-RDH14C9J2C7 533 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 DARSP14868 501 aaKnown RBP15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 ATP2B1P20020 1258 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 AVPR2P30518 371 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 CIITAP33076 1130 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 GPC3P51654 580 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 UGCGQ16739 394 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 CES5AQ6NT32 575 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 SLC39A11Q8N1S5 342 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 LENG9Q96B70 501 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 HCFC2Q9Y5Z7 792 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 KMT2EQ8IZD2 1858 aa15.65■□□□□ 0.1
SPTLC2-202ENST00000554365 MYH9P35579 1960 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 CYP3A7-CYP3A51PA0A087WV96 503 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 A0A0U1RQF3 1178 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 C2orf71A6NGG8 1288 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 MSH4O15457 936 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 TDP2O95551 362 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 PDGFBP01127 241 aaPredicted RBP15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 CYP3A7P24462 503 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 ALDH7A1P49419 539 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 USP11P51784 963 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 KRT85P78386 507 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 TBC1D8BQ0IIM8 1120 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 SF3A1Q15459 793 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 ZNF174Q15697 407 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 LETM2Q2VYF4 491 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 ZNF710Q8N1W2 664 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 MRPL43Q8N983 215 aaKnown RBP15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 LINC00301Q8NCQ3 95 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 KREMEN2Q8NCW0 462 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 POMKQ9H5K3 350 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 RCOR1Q9UKL0 485 aa15.64■□□□□ 0.09
SPTLC2-202ENST00000554365 C2CD4DB7Z1M9 353 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 SLC37A4O43826 429 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 GAS7O60861 476 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 CLASP2O75122 1294 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 CXCL14O95715 111 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 EOMESO95936 686 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 JAK3P52333 1124 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 BCAR1P56945 870 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 CEBPZQ03701 1054 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 ITIH3Q06033 890 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 BMS1Q14692 1282 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 LRCH2Q5VUJ6 765 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 PPP4R3AQ6IN85 833 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 MOXD1Q6UVY6 613 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 ZNF598Q86UK7 904 aaKnown RBP15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
SPTLC2-202ENST00000554365 LEO1Q8WVC0 666 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms