RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 CTTNQ14247 550 aaKnown RBP6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 PGM5Q15124 567 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 ASTE1Q2TB18 679 aaPredicted RBP6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 MUM1L1Q5H9M0 696 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 ANGEL2Q5VTE6 544 aaKnown RBP6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 STXBP4Q6ZWJ1 553 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 MIER3Q7Z3K6 550 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 VSIG10LQ86VR7 867 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 SFR1Q86XK3 245 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 SLC9A9Q8IVB4 645 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 TPH2Q8IWU9 490 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 C4orf19Q8IY42 314 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 PDCL2Q8N4E4 241 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 SLC17A8Q8NDX2 589 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 NEK11Q8NG66 645 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 ADAM32Q8TC27 787 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 GPRASP2Q96D09 838 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 BORCS6Q96GS4 357 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 TAAR1Q96RJ0 339 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 PDCD2LQ9BRP1 358 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 DESI2Q9BSY9 194 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 RUSC1Q9BVN2 902 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 ST6GALNAC4Q9H4F1 302 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 NHEJ1Q9H9Q4 299 aaPredicted RBP6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 PARVGQ9HBI0 331 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 RAVER2Q9HCJ3 691 aaKnown RBP6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 PXMP2Q9NR77 195 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 PICK1Q9NRD5 415 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 ANKEF1Q9NU02 776 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 AIPL1Q9NZN9 384 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 CEP72Q9P209 647 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 REXO2Q9Y3B8 237 aaKnown RBP6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 DAAM1Q9Y4D1 1078 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 MRFAP1Q9Y605 127 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
VIPAS39-204ENST00000553576 OTOFQ9HC10 1997 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ATP8B3O60423 1300 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 NFASCO94856 1347 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 A0A0G2JMZ2 1700 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RSPH10B2B2RC85 870 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RBAK-RBAKDNI3L0D1 243 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PES1O00541 588 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PJA2O43164 708 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 KRT86O43790 486 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 TBCAO75347 108 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 USP2O75604 605 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 URI1O94763 535 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PRPF6O94906 941 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 FAM13AO94988 1023 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RSPH10BP0C881 870 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 NR2F2P24468 414 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 MAP2K3P46734 347 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 QARSP47897 775 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 KLK7P49862 253 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 HERVK_113P62684 666 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RBM10P98175 930 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 CYP4A11Q02928 519 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PTK2Q05397 1052 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 HSP90AA2PQ14568 343 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 CCDC40Q4G0X9 1142 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ARHGAP29Q52LW3 1261 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ZNF746Q6NUN9 644 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PDXDC1Q6P996 788 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RNF207Q6ZRF8 634 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 C1orf229Q6ZS94 237 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RSRC2Q7L4I2 434 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 NELFCDQ8IXH7 590 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 C12orf56Q8IXR9 622 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 CPXCR1Q8N123 301 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 MYCT1Q8N699 235 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ACRBPQ8NEB7 543 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 GOLGA5Q8TBA6 731 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PIGOQ8TEQ8 1089 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 KCNN1Q92952 543 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 EEF2KMTQ96G04 330 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 UIMC1Q96RL1 719 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 WRNIP1Q96S55 665 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 RMDN3Q96TC7 470 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 GAS2L1Q99501 681 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 LXNQ9BS40 222 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 TSGA10Q9BZW7 698 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 TBC1D7Q9P0N9 293 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 WRAP73Q9P2S5 460 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 PPP1R1BQ9UD71 204 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 CDC23Q9UJX2 597 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ZNF214Q9UL59 606 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 CTDP1Q9Y5B0 961 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ZHX2Q9Y6X8 837 aa6.6□□□□□ -1.35
VIPAS39-204ENST00000553576 ASTN1O14525 1302 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 CTAGE9A4FU28 777 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 C1QTNF9BB2RNN3 333 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 ZBTB39O15060 712 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 EPHB6O15197 1021 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 MAPK13O15264 365 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 PMM2O15305 246 aa6.59□□□□□ -1.35
VIPAS39-204ENST00000553576 DKC1O60832 514 aaKnown RBP eCLIP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms