RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 ARHGEF35A5YM69 484 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 K7ELQ4 463 aaPredicted RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 LAD1O00515 517 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 WNT7AO00755 349 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 GPR32O75388 356 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 DGAT1O75907 488 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 XRCC6P12956 609 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 GCGRP47871 477 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 GPC3P51654 580 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 TFDP1Q14186 410 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 EMC2Q15006 297 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 TARBP2Q15633 366 aaKnown RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 ZRSR1Q15695 479 aaKnown RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 PAN2Q504Q3 1202 aaKnown RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 KRT79Q5XKE5 535 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 TWF2Q6IBS0 349 aaKnown RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 MAEAQ7L5Y9 396 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 CATSPER4Q7RTX7 472 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 ZNF410Q86VK4 478 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 FAM228AQ86W67 206 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 NPAS4Q8IUM7 802 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 ABI1Q8IZP0 508 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 RNF169Q8NCN4 708 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 PIGOQ8TEQ8 1089 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 TMEM143Q96AN5 459 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 CDK5RAP3Q96JB5 506 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 FDXACB1Q9BRP7 624 aaPredicted RBP6.57□□□□□ -1.36
CCDC65-204ENST00000552188 ATP6V0A4Q9HBG4 840 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 ERVK-5Q9HDB9 667 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 RWDD3Q9Y3V2 267 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 PCDHB6Q9Y5E3 794 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 COL4A3BPQ9Y5P4 624 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 PLXNA4Q9HCM2 1894 aa6.57□□□□□ -1.36
CCDC65-204ENST00000552188 ADGRA3Q8IWK6 1321 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 A0A087WWV3 80 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 IGKV6-21A0A0C4DH24 114 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 LINC01553A4QN01 128 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 RFXAPO00287 272 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 ZBTB39O15060 712 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 HOXA2O43364 376 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 USO1O60763 962 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 CSDE1O75534 798 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 ERLIN2O94905 339 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 STBD1O95210 358 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 LYPLA2O95372 231 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 BMP15O95972 392 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 DARSP14868 501 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 MUTP22033 750 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 FGFR4P22455 802 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 RPA1P27694 616 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 CTNNB1P35222 781 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 PHKA2P46019 1235 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 SARSP49591 514 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 ERVK-21P61565 698 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 HTRA4P83105 476 aaPredicted RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 SPIRE1Q08AE8 756 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 MMRN1Q13201 1228 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 GPM6BQ13491 265 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 CUL4AQ13619 759 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 PDIA5Q14554 519 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 MXD4Q14582 209 aaPredicted RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 PTPROQ16827 1216 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 KMT5BQ4FZB7 885 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 SLC24A5Q71RS6 500 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 BRAPQ7Z569 592 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 CATSPER3Q86XQ3 398 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 KSR1Q8IVT5 923 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 LINC01465Q8N7H1 131 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 RASSF8Q8NHQ8 419 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 SNX29Q8TEQ0 813 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 SPIRE2Q8WWL2 714 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 PRPF31Q8WWY3 499 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 INTS4Q96HW7 963 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 HSD17B14Q9BPX1 270 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 POLR3CQ9BUI4 534 aaPredicted RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 DHX33Q9H6R0 707 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 AAASQ9NRG9 546 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 RGS18Q9NS28 235 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 WRAP73Q9P2S5 460 aaPredicted RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 KIAA1024Q9UPX6 916 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 DNM3Q9UQ16 869 aa6.56□□□□□ -1.36
CCDC65-204ENST00000552188 PIN4Q9Y237 131 aaKnown RBP6.56□□□□□ -1.36
CCDC65-204ENST00000552188 VWA3AA6NCI4 1184 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 LRRIQ4A6NIV6 560 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TBKBP1A7MCY6 615 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 RBAK-RBAKDNI3L0D1 243 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 MED24O75448 989 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 DGKIO75912 1065 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 SSBP05455 408 aaKnown RBP eCLIP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 RB1P06400 928 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 SKIP12755 728 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 PRPHP41219 470 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 TOB1P50616 345 aaPredicted RBP6.55□□□□□ -1.36
CCDC65-204ENST00000552188 LAMTOR4Q0VGL1 99 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 GRB10Q13322 594 aa6.55□□□□□ -1.36
CCDC65-204ENST00000552188 DRP2Q13474 957 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms