RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CD207Q9UJ71 328 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 PCDHA12Q9UN75 941 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 INPP5FQ9Y2H2 1132 aa17.78■□□□□ 0.44
COX6A1-203ENST00000550009 MED24O75448 989 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 BAG4O95429 457 aaKnown RBP17.77■□□□□ 0.44
COX6A1-203ENST00000550009 SPATA31C1P0DKV0 1188 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 BCAR1P56945 870 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 DUSP6Q16828 381 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 LLGL2Q6P1M3 1020 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 MAEAQ7L5Y9 396 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 FERMT3Q86UX7 667 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 ZNF280BQ86YH2 543 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 ABI1Q8IZP0 508 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 SLC39A11Q8N1S5 342 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 LRRC43Q8N309 656 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 RNF149Q8NC42 400 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 SLC7A3Q8WY07 619 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.44
COX6A1-203ENST00000550009 VN1R3Q9BXE9 311 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 NRDE2Q9H7Z3 1164 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 POLD4Q9HCU8 107 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 GPRC5CQ9NQ84 441 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 AGPAT5Q9NUQ2 364 aa17.77■□□□□ 0.44
COX6A1-203ENST00000550009 DOCK6Q96HP0 2047 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 OFD1O75665 1012 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 EOMESO95936 686 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
COX6A1-203ENST00000550009 TRIM29Q14134 588 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 SMAD2Q15796 467 aaKnown RBP17.76■□□□□ 0.43
COX6A1-203ENST00000550009 KANK3Q6NY19 840 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 CDR2LQ86X02 465 aaPredicted RBP17.76■□□□□ 0.43
COX6A1-203ENST00000550009 PSPC1Q8WXF1 523 aaKnown RBP17.76■□□□□ 0.43
COX6A1-203ENST00000550009 C8orf76Q96K31 380 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 ZNF558Q96NG5 402 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 MTRQ99707 1265 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 NAP1L4Q99733 375 aaKnown RBP17.76■□□□□ 0.43
COX6A1-203ENST00000550009 TCF25Q9BQ70 676 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 EIF2AQ9BY44 585 aaKnown RBP17.76■□□□□ 0.43
COX6A1-203ENST00000550009 GBP3Q9H0R5 595 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 TBC1D13Q9NVG8 400 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 MYH11P35749 1972 aa17.76■□□□□ 0.43
COX6A1-203ENST00000550009 TECTAO75443 2155 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 ZC3H11AO75152 810 aaKnown RBP eCLIP17.75■□□□□ 0.43
COX6A1-203ENST00000550009 DDHD2O94830 711 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 RFC5P40937 340 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 TECP42680 631 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 RARRES1P49788 294 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 PLCB3Q01970 1234 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 SMAD4Q13485 552 aaKnown RBP17.75■□□□□ 0.43
COX6A1-203ENST00000550009 CAPSQ13938 189 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 KCNC3Q14003 757 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 ECM1Q16610 540 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 SMG8Q8ND04 991 aaKnown RBP17.75■□□□□ 0.43
COX6A1-203ENST00000550009 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 ENTPD7Q9NQZ7 604 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 CHST12Q9NRB3 414 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 SPG21Q9NZD8 308 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 USP20Q9Y2K6 914 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 HES2Q9Y543 173 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 PCDHB2Q9Y5E7 798 aa17.75■□□□□ 0.43
COX6A1-203ENST00000550009 TTLL13PA6NNM8 815 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 B4GALT5O43286 388 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 HOXA2O43364 376 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
COX6A1-203ENST00000550009 GLRA2P23416 452 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 SLC11A1P49279 550 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 TOB1P50616 345 aaPredicted RBP17.74■□□□□ 0.43
COX6A1-203ENST00000550009 UBE3AQ05086 875 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 AMHR2Q16671 573 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 POTEGQ6S5H5 508 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 CATSPER3Q86XQ3 398 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 ADHFE1Q8IWW8 467 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 C4orf32Q8N8J7 132 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 SMRP1Q8NCR6 262 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 TRAIPQ9BWF2 469 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 MIOSQ9NXC5 875 aa17.74■□□□□ 0.43
COX6A1-203ENST00000550009 USP15Q9Y4E8 981 aaPredicted RBP17.74■□□□□ 0.43
COX6A1-203ENST00000550009 F8W810 466 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 NCK2O43639 380 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 TSPAN1O60635 241 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 DKC1O60832 514 aaKnown RBP eCLIP17.73■□□□□ 0.43
COX6A1-203ENST00000550009 LYPLA2O95372 231 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 EYA4O95677 639 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 ARL2P36404 184 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 PUS10Q3MIT2 529 aaKnown RBP17.73■□□□□ 0.43
COX6A1-203ENST00000550009 NOMO2Q5JPE7 1267 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 SYCE2Q6PIF2 218 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 OTUD6AQ7L8S5 288 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 SRGAP1Q7Z6B7 1085 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 BSNDQ8WZ55 320 aa17.73■□□□□ 0.43
COX6A1-203ENST00000550009 JPH2Q9BR39 696 aaPredicted RBP17.73■□□□□ 0.43
COX6A1-203ENST00000550009 C2orf71A6NGG8 1288 aa17.72■□□□□ 0.43
COX6A1-203ENST00000550009 ZNF623O75123 536 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms