RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 CCNA1P78396 465 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 IFT88Q13099 833 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 CLUL1Q15846 466 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 EDRF1Q3B7T1 1238 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 SEZ6Q53EL9 994 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 NT5DC1Q5TFE4 455 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 EMBQ6PCB8 327 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 PNKPQ96T60 521 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 TTC7AQ9ULT0 858 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 TM4SF1P30408 202 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 HDLBPQ00341 1268 aaKnown RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 ZNF568Q3ZCX4 644 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 NBPF12Q5TAG4 269 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 ZNF564Q8TBZ8 553 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 FAM163AQ96GL9 167 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 MTRQ99707 1265 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 ARHGAP20Q9P2F6 1191 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 CAPN7Q9Y6W3 813 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 CAPN9O14815 690 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 COPB2P35606 906 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 GIT2Q14161 759 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 OR6B2Q6IFH4 312 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 DDX42Q86XP3 938 aaKnown RBP eCLIP16.12■□□□□ 0.17
CUX1-214ENST00000550008 RFX6Q8HWS3 928 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 FBXL13Q8NEE6 735 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 RBAKQ9NYW8 714 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 MAGED2Q9UNF1 606 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 AKAP3O75969 853 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 MYCP01106 439 aaPredicted RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 SOX10P56693 466 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 C2CD6Q53TS8 623 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 RNF149Q8NC42 400 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 LPAR1Q92633 364 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 SEPT10Q9P0V9 454 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 FAM198AQ9UFP1 575 aa16.12■□□□□ 0.17
CUX1-214ENST00000550008 AGO2Q9UKV8 859 aaKnown RBP16.12■□□□□ 0.17
CUX1-214ENST00000550008 M0QZ92 97 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
CUX1-214ENST00000550008 NR1D1P20393 614 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 SH3RF1Q7Z6J0 888 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 SH2D3CQ8N5H7 860 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 PSPC1Q8WXF1 523 aaKnown RBP16.11■□□□□ 0.17
CUX1-214ENST00000550008 EDEM3Q9BZQ6 932 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 RPF1Q9H9Y2 349 aaKnown RBP16.11■□□□□ 0.17
CUX1-214ENST00000550008 INTS9Q9NV88 658 aaKnown RBP16.11■□□□□ 0.17
CUX1-214ENST00000550008 USP20Q9Y2K6 914 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 MAD1L1Q9Y6D9 718 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 ADAMTS3O15072 1205 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 GGPS1O95749 300 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 TRIM65Q6PJ69 517 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 ARMC9Q7Z3E5 817 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 GRK7Q8WTQ7 553 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 NGRNQ9NPE2 291 aaKnown RBP16.11■□□□□ 0.17
CUX1-214ENST00000550008 HOMER3Q9NSC5 361 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 APEX2Q9UBZ4 518 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 ANAPC5Q9UJX4 755 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 SREBF1P36956 1147 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 NFX1Q12986 1120 aaKnown RBP16.11■□□□□ 0.17
CUX1-214ENST00000550008 KLHDC7AQ5VTJ3 777 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 CACNA2D3Q8IZS8 1091 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 C1orf54Q8WWF1 131 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 CBWD1Q9BRT8 395 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 MLXIPLQ9NP71 852 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 KLHL11Q9NVR0 708 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
CUX1-214ENST00000550008 KCNA1Q09470 495 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 SNRNP35Q16560 246 aaKnown RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 RFFLQ8WZ73 363 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 MRPL47Q9HD33 250 aaKnown RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 EML1O00423 815 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 SART1O43290 800 aaKnown RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 HOXA7P31268 230 aaPredicted RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 HERVK_113P62684 666 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 ERICH1Q86X53 443 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 SLC35G2Q8TBE7 412 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 GLIS2Q9BZE0 524 aaPredicted RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 TRIM7Q9C029 511 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 AGPAT3Q9NRZ7 376 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 PCSK1NQ9UHG2 260 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 YWHAGP61981 247 aaKnown RBP eCLIP16.1■□□□□ 0.17
CUX1-214ENST00000550008 BASP1P80723 227 aaKnown RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 APOBEC3FQ8IUX4 373 aaKnown RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 AGPAT1Q99943 283 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 FAM118BQ9BPY3 351 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 TMX2Q9Y320 296 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 PPFIA4O75335 1185 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 SLFN12LQ6IEE8 588 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 CPA5Q8WXQ8 436 aa16.1■□□□□ 0.17
CUX1-214ENST00000550008 RNPC3Q96LT9 517 aaKnown RBP16.1■□□□□ 0.17
CUX1-214ENST00000550008 CCDC188H7C350 402 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 STAT5BP51692 787 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 PRKCEQ02156 737 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 NME8Q8N427 588 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms