RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 TIGD1Q96MW7 591 aa5.56□□□□□ -1.52
APP-217ENST00000548570 C7orf25Q9BPX7 421 aa5.56□□□□□ -1.52
APP-217ENST00000548570 KIFC3Q9BVG8 833 aa5.56□□□□□ -1.52
APP-217ENST00000548570 KATNAL1Q9BW62 490 aa5.56□□□□□ -1.52
APP-217ENST00000548570 STRA6Q9BX79 667 aa5.56□□□□□ -1.52
APP-217ENST00000548570 NT5C3AQ9H0P0 336 aa5.56□□□□□ -1.52
APP-217ENST00000548570 WNT8AQ9H1J5 351 aa5.56□□□□□ -1.52
APP-217ENST00000548570 IKZF4Q9H2S9 585 aa5.56□□□□□ -1.52
APP-217ENST00000548570 MINDY3Q9H8M7 445 aa5.56□□□□□ -1.52
APP-217ENST00000548570 NRBP2Q9NSY0 501 aa5.56□□□□□ -1.52
APP-217ENST00000548570 FAM13BQ9NYF5 915 aa5.56□□□□□ -1.52
APP-217ENST00000548570 CCDC39Q9UFE4 941 aa5.56□□□□□ -1.52
APP-217ENST00000548570 TUBE1Q9UJT0 475 aa5.56□□□□□ -1.52
APP-217ENST00000548570 TBX21Q9UL17 535 aa5.56□□□□□ -1.52
APP-217ENST00000548570 ZNF215Q9UL58 517 aaPredicted RBP5.56□□□□□ -1.52
APP-217ENST00000548570 USP20Q9Y2K6 914 aa5.56□□□□□ -1.52
APP-217ENST00000548570 PLXNA1Q9UIW2 1896 aa5.56□□□□□ -1.52
APP-217ENST00000548570 COL1A2P08123 1366 aa5.55□□□□□ -1.52
APP-217ENST00000548570 SMIM35A0A1B0GVV1 85 aa5.55□□□□□ -1.52
APP-217ENST00000548570 ARHGEF35A5YM69 484 aa5.55□□□□□ -1.52
APP-217ENST00000548570 RRN3P2A6NIE6 340 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CCDC85CA6NKD9 419 aa5.55□□□□□ -1.52
APP-217ENST00000548570 PQBP1O60828 265 aaKnown RBP5.55□□□□□ -1.52
APP-217ENST00000548570 DKC1O60832 514 aaKnown RBP eCLIP5.55□□□□□ -1.52
APP-217ENST00000548570 CSDE1O75534 798 aaKnown RBP5.55□□□□□ -1.52
APP-217ENST00000548570 VTNP04004 478 aa5.55□□□□□ -1.52
APP-217ENST00000548570 SSBP05455 408 aaKnown RBP eCLIP5.55□□□□□ -1.52
APP-217ENST00000548570 RFC5P40937 340 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CASP5P51878 434 aa5.55□□□□□ -1.52
APP-217ENST00000548570 RTP1P59025 263 aa5.55□□□□□ -1.52
APP-217ENST00000548570 RBL2Q08999 1139 aa5.55□□□□□ -1.52
APP-217ENST00000548570 KCNA1Q09470 495 aa5.55□□□□□ -1.52
APP-217ENST00000548570 TBC1D8BQ0IIM8 1120 aa5.55□□□□□ -1.52
APP-217ENST00000548570 TMEM62Q0P6H9 643 aa5.55□□□□□ -1.52
APP-217ENST00000548570 STK4Q13043 487 aa5.55□□□□□ -1.52
APP-217ENST00000548570 PTK7Q13308 1070 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CAPSQ13938 189 aa5.55□□□□□ -1.52
APP-217ENST00000548570 POSTNQ15063 836 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CAMK4Q16566 473 aa5.55□□□□□ -1.52
APP-217ENST00000548570 PTGISQ16647 500 aa5.55□□□□□ -1.52
APP-217ENST00000548570 AMHR2Q16671 573 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CSPP1Q1MSJ5 1256 aa5.55□□□□□ -1.52
APP-217ENST00000548570 FAM26DQ5JW98 314 aa5.55□□□□□ -1.52
APP-217ENST00000548570 ZNF618Q5T7W0 954 aa5.55□□□□□ -1.52
APP-217ENST00000548570 FAM102BQ5T8I3 360 aa5.55□□□□□ -1.52
APP-217ENST00000548570 NT5DC1Q5TFE4 455 aa5.55□□□□□ -1.52
APP-217ENST00000548570 EFCAB12Q6NXP0 572 aa5.55□□□□□ -1.52
APP-217ENST00000548570 SV2BQ7L1I2 683 aa5.55□□□□□ -1.52
APP-217ENST00000548570 OTUD6AQ7L8S5 288 aa5.55□□□□□ -1.52
APP-217ENST00000548570 DYMQ7RTS9 669 aa5.55□□□□□ -1.52
APP-217ENST00000548570 NECAB2Q7Z6G3 386 aa5.55□□□□□ -1.52
APP-217ENST00000548570 KIAA0895Q8NCT3 520 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CNNM3Q8NE01 707 aa5.55□□□□□ -1.52
APP-217ENST00000548570 DNAJB3Q8WWF6 145 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CDK5RAP3Q96JB5 506 aa5.55□□□□□ -1.52
APP-217ENST00000548570 TOX2Q96NM4 488 aa5.55□□□□□ -1.52
APP-217ENST00000548570 MED15Q96RN5 788 aa5.55□□□□□ -1.52
APP-217ENST00000548570 PPP1R16BQ96T49 567 aa5.55□□□□□ -1.52
APP-217ENST00000548570 NTPCRQ9BSD7 190 aaKnown RBP5.55□□□□□ -1.52
APP-217ENST00000548570 NOC4LQ9BVI4 516 aaKnown RBP5.55□□□□□ -1.52
APP-217ENST00000548570 CCDC113Q9H0I3 377 aa5.55□□□□□ -1.52
APP-217ENST00000548570 FAM49AQ9H0Q0 323 aaPredicted RBP5.55□□□□□ -1.52
APP-217ENST00000548570 POLR3FQ9H1D9 316 aaPredicted RBP5.55□□□□□ -1.52
APP-217ENST00000548570 TNMDQ9H2S6 317 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CUEDC2Q9H467 287 aa5.55□□□□□ -1.52
APP-217ENST00000548570 CLSTN2Q9H4D0 955 aa5.55□□□□□ -1.52
APP-217ENST00000548570 AGO3Q9H9G7 860 aaKnown RBP5.55□□□□□ -1.52
APP-217ENST00000548570 SUGCTQ9HAC7 445 aa5.55□□□□□ -1.52
APP-217ENST00000548570 ATP6V0A4Q9HBG4 840 aa5.55□□□□□ -1.52
APP-217ENST00000548570 IFT122Q9HBG6 1241 aa5.55□□□□□ -1.52
APP-217ENST00000548570 TCEAL9Q9UHQ7 104 aa5.55□□□□□ -1.52
APP-217ENST00000548570 PPME1Q9Y570 386 aa5.55□□□□□ -1.52
APP-217ENST00000548570 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
APP-217ENST00000548570 ABLIM1O14639 778 aa5.54□□□□□ -1.52
APP-217ENST00000548570 TERTO14746 1132 aaKnown RBP5.54□□□□□ -1.52
APP-217ENST00000548570 KIAA0355O15063 1070 aa5.54□□□□□ -1.52
APP-217ENST00000548570 MAGEB2O15479 319 aa5.54□□□□□ -1.52
APP-217ENST00000548570 NBNO60934 754 aa5.54□□□□□ -1.52
APP-217ENST00000548570 CKBP12277 381 aa5.54□□□□□ -1.52
APP-217ENST00000548570 PLS3P13797 630 aa5.54□□□□□ -1.52
APP-217ENST00000548570 FGFR4P22455 802 aa5.54□□□□□ -1.52
APP-217ENST00000548570 NMT1P30419 496 aaKnown RBP5.54□□□□□ -1.52
APP-217ENST00000548570 TXLNAP40222 546 aa5.54□□□□□ -1.52
APP-217ENST00000548570 NPTX2P47972 431 aa5.54□□□□□ -1.52
APP-217ENST00000548570 GPC3P51654 580 aa5.54□□□□□ -1.52
APP-217ENST00000548570 POLGP54098 1239 aaPredicted RBP5.54□□□□□ -1.52
APP-217ENST00000548570 EPHB4P54760 987 aa5.54□□□□□ -1.52
APP-217ENST00000548570 LAMTOR4Q0VGL1 99 aa5.54□□□□□ -1.52
APP-217ENST00000548570 COASYQ13057 564 aa5.54□□□□□ -1.52
APP-217ENST00000548570 KIZQ2M2Z5 673 aa5.54□□□□□ -1.52
APP-217ENST00000548570 PUS10Q3MIT2 529 aaKnown RBP5.54□□□□□ -1.52
APP-217ENST00000548570 FAM47CQ5HY64 1035 aa5.54□□□□□ -1.52
APP-217ENST00000548570 IER5Q5VY09 327 aa5.54□□□□□ -1.52
APP-217ENST00000548570 CDCA2Q69YH5 1023 aaPredicted RBP5.54□□□□□ -1.52
APP-217ENST00000548570 UNC13DQ70J99 1090 aa5.54□□□□□ -1.52
APP-217ENST00000548570 C16orf59Q7L2K0 433 aa5.54□□□□□ -1.52
APP-217ENST00000548570 EPM2AIP1Q7L775 607 aaPredicted RBP5.54□□□□□ -1.52
APP-217ENST00000548570 SFR1Q86XK3 245 aa5.54□□□□□ -1.52
APP-217ENST00000548570 SMYD4Q8IYR2 804 aaPredicted RBP5.54□□□□□ -1.52
APP-217ENST00000548570 TMEM161BQ8NDZ6 487 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms