RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 DDX25Q9UHL0 483 aaKnown RBP7.35□□□□□ -1.23
CDCA3-209ENST00000544610 HOOK1Q9UJC3 728 aaKnown RBP7.35□□□□□ -1.23
CDCA3-209ENST00000544610 HPSEQ9Y251 543 aa7.35□□□□□ -1.23
CDCA3-209ENST00000544610 UBIAD1Q9Y5Z9 338 aa7.35□□□□□ -1.23
CDCA3-209ENST00000544610 CDY2AQ9Y6F7 541 aa7.35□□□□□ -1.23
CDCA3-209ENST00000544610 SQORQ9Y6N5 450 aa7.35□□□□□ -1.23
CDCA3-209ENST00000544610 USP34Q70CQ2 3546 aa7.35□□□□□ -1.23
CDCA3-209ENST00000544610 IGLV3-22A0A075B6J6 115 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 RRN3P2A6NIE6 340 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 LINC01565O15544 149 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 EDIL3O43854 480 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 EYA4O95677 639 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 DNAJB1P25685 340 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 CD52P31358 61 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 MCM7P33993 719 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 FOSBP53539 338 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 ADAM15Q13444 863 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 CALCRLQ16602 461 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 HERC4Q5GLZ8 1057 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-209ENST00000544610 HYIQ5T013 277 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 IER5Q5VY09 327 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 RBM43Q6ZSC3 357 aaKnown RBP7.34□□□□□ -1.23
CDCA3-209ENST00000544610 HFE2Q6ZVN8 426 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 FMR1NBQ8N0W7 255 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-209ENST00000544610 ENGASEQ8NFI3 743 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 RDM1Q8NG50 284 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 ETNPPLQ8TBG4 499 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 RASGRP4Q8TDF6 673 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 GLMNQ92990 594 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 ZBTB10Q96DT7 871 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 MSLNLQ96KJ4 702 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 FBXL18Q96ME1 805 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 PCYT2Q99447 389 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 FTHL17Q9BXU8 183 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 JPH1Q9HDC5 661 aaPredicted RBP7.34□□□□□ -1.23
CDCA3-209ENST00000544610 ALG13Q9NP73 1137 aaKnown RBP7.34□□□□□ -1.23
CDCA3-209ENST00000544610 JADE2Q9NQC1 790 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 TBC1D22BQ9NU19 505 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 MUTYHQ9UIF7 546 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 CD207Q9UJ71 328 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 PCDHA12Q9UN75 941 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 PLAGL2Q9UPG8 496 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 TRPV2Q9Y5S1 764 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 MRPL42Q9Y6G3 142 aaKnown RBP7.34□□□□□ -1.23
CDCA3-209ENST00000544610 TRIOO75962 3097 aa7.34□□□□□ -1.23
CDCA3-209ENST00000544610 NFASCO94856 1347 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 IGSF9BQ9UPX0 1349 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 KDM3AQ9Y4C1 1321 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 KINO60870 393 aaKnown RBP7.33□□□□□ -1.24
CDCA3-209ENST00000544610 CSPG5O95196 566 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 ITGB1P05556 798 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 INSRRP14616 1297 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 NDUFV1P49821 464 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 MRE11P49959 708 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 IGBP1P78318 339 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 PPP2R5CQ13362 524 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 SNW1Q13573 536 aaKnown RBP7.33□□□□□ -1.24
CDCA3-209ENST00000544610 ZNF174Q15697 407 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 UBE2SQ16763 222 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 CCDC183Q5T5S1 534 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 HAUS3Q68CZ6 603 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 B3GNT9Q6UX72 402 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 PLPPR4Q7Z2D5 763 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 RTN4RL1Q86UN2 441 aaPredicted RBP7.33□□□□□ -1.24
CDCA3-209ENST00000544610 RNF135Q8IUD6 432 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 EFHBQ8N7U6 833 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 IQUBQ8NA54 791 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 SMRP1Q8NCR6 262 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 ERMNQ8TAM6 284 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 SPPL3Q8TCT6 385 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 EDAQ92838 391 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 PPP2R3CQ969Q6 453 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 LENG9Q96B70 501 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 MFSD14AQ96MC6 490 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 MXRA8Q9BRK3 442 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 NT5C3AQ9H0P0 336 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 FAM49AQ9H0Q0 323 aaPredicted RBP7.33□□□□□ -1.24
CDCA3-209ENST00000544610 IGFLR1Q9H665 355 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 TMEM260Q9NX78 707 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 PKD2L1Q9P0L9 805 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 CLEC1BQ9P126 229 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 SLC9A2Q9UBY0 812 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 STK17AQ9UEE5 414 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 PADI3Q9ULW8 664 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 PCDHA2Q9Y5H9 948 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 KIAA1671Q9BY89 1806 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 MYO15AQ9UKN7 3530 aa7.33□□□□□ -1.24
CDCA3-209ENST00000544610 BRWD1Q9NSI6 2320 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SMIM35A0A1B0GVV1 85 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 LOC730098B7Z3J9 87 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 M0QZ92 97 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 DTNBO60941 627 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 GLP2RO95838 553 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SLFN14P0C7P3 912 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 STAG3L1P0CL83 205 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SFNP31947 248 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 ZNF76P36508 570 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 UBA7P41226 1012 aa7.32□□□□□ -1.24
CDCA3-209ENST00000544610 SYKP43405 635 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms