RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 TRAIPQ9BWF2 469 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 PCDHA10Q9Y5I2 948 aa17.92■□□□□ 0.46
SCARB1-205ENST00000538291 PALMO75781 387 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 ADORA2BP29275 332 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 SLC7A5Q01650 507 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 KRT80Q6KB66 452 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 SIRT2Q8IXJ6 389 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 TTC8Q8TAM2 541 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 SMARCA1P28370 1054 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 HABP4Q5JVS0 413 aaKnown RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 GAS2L3Q86XJ1 694 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 MTIF3Q9H2K0 278 aaKnown RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 FGFR1OP2Q9NVK5 253 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 POTEFA5A3E0 1075 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 POTEIP0CG38 1075 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 RALAP11233 206 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 HEATR6Q6AI08 1181 aaKnown RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 POTEGQ6S5H5 508 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 POTEEQ6S8J3 1075 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 SLC9A2Q9UBY0 812 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 ARHGAP31Q2M1Z3 1444 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 E5RI56 91 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 MOCS2O96007 188 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 NR1D1P20393 614 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 EEF1B2P24534 225 aaKnown RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 USP11P51784 963 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 EFNA5P52803 228 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 CAV1Q03135 178 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 BTBD8Q5XKL5 378 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 EMBQ6PCB8 327 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 ENOSF1Q7L5Y1 443 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 NCLNQ969V3 563 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 ZNF668Q96K58 619 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 IP6K2Q9UHH9 426 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 PI4K2BG5E9Z4 385 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 IMPG1Q17R60 797 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 ZBTB41Q5SVQ8 909 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 NEDD1Q8NHV4 660 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 PPP2R3CQ969Q6 453 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 TTC17Q96AE7 1141 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 KIF12Q96FN5 646 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 GJD4Q96KN9 370 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 RBAKQ9NYW8 714 aaPredicted RBP17.91■□□□□ 0.46
SCARB1-205ENST00000538291 PCSK1NQ9UHG2 260 aa17.91■□□□□ 0.46
SCARB1-205ENST00000538291 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 HMGCS2P54868 508 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 YAF2Q8IY57 180 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 GPD1LQ8N335 351 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 TRIM49BA6NDI0 452 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 SPARCL1Q14515 664 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 FAM133BQ5BKY9 247 aaKnown RBP17.9■□□□□ 0.46
SCARB1-205ENST00000538291 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
SCARB1-205ENST00000538291 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 INTS2Q9H0H0 1204 aaKnown RBP17.9■□□□□ 0.46
SCARB1-205ENST00000538291 DYRK4Q9NR20 520 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 SNX24Q9Y343 169 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 LDHDQ86WU2 507 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 FAM96AQ9H5X1 160 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 NFU1Q9UMS0 254 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 CHD1O14646 1710 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 LRRC53A6NM62 1247 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 KLHL38Q2WGJ6 581 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 TRIM72Q6ZMU5 477 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 TRMT10CQ7L0Y3 403 aaKnown RBP17.9■□□□□ 0.46
SCARB1-205ENST00000538291 ZNF564Q8TBZ8 553 aaPredicted RBP17.9■□□□□ 0.46
SCARB1-205ENST00000538291 PARD6BQ9BYG5 372 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 GJB4Q9NTQ9 266 aa17.9■□□□□ 0.46
SCARB1-205ENST00000538291 MAPK13O15264 365 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 TRAPPC3O43617 180 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 MYBL1P10243 752 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 TOB2Q14106 344 aaPredicted RBP17.89■□□□□ 0.46
SCARB1-205ENST00000538291 NFIXQ14938 502 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 TBCCQ15814 346 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 DUOXA2Q1HG44 320 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 VPS11Q9H270 941 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 SUDS3Q9H7L9 328 aaPredicted RBP17.89■□□□□ 0.46
SCARB1-205ENST00000538291 SPON1Q9HCB6 807 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 SARS2Q9NP81 518 aaKnown RBP17.89■□□□□ 0.46
SCARB1-205ENST00000538291 ITM2BQ9Y287 266 aa17.89■□□□□ 0.46
SCARB1-205ENST00000538291 TXNP10599 105 aaKnown RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 NME3Q13232 169 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 EPHA7Q15375 998 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 LCA5Q86VQ0 697 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 RNF25Q96BH1 459 aaPredicted RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 PRDM5Q9NQX1 630 aaPredicted RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 AGO2Q9UKV8 859 aaKnown RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 HNRNPCL2B2RXH8 293 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 H3BRJ5 948 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 HNRNPCL1O60812 293 aaKnown RBP17.89■□□□□ 0.45
SCARB1-205ENST00000538291 TRPA1O75762 1119 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 ANP32DO95626 131 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 GCKP35557 465 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 BCAR1P56945 870 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 OXER1Q8TDS5 423 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 SAAL1Q96ER3 474 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 TNIP3Q96KP6 325 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 NUP85Q9BW27 656 aa17.89■□□□□ 0.45
SCARB1-205ENST00000538291 ZNRF3Q9ULT6 936 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms