RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 CDC25BP30305 580 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 NLRP5P59047 1200 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 NKX3-2P78367 333 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 TNFAIP2Q03169 654 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 AP3B2Q13367 1082 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 SETDB1Q15047 1291 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 PGM5Q15124 567 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 PEAR1Q5VY43 1037 aaPredicted RBP6.77□□□□□ -1.33
DDB1-210ENST00000538129 KCNV1Q6PIU1 500 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 NOL8Q76FK4 1167 aaKnown RBP6.77□□□□□ -1.33
DDB1-210ENST00000538129 CCNJLQ8IV13 435 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 TMEM130Q8N3G9 435 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 SCFD2Q8WU76 684 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 SREK1Q8WXA9 508 aaKnown RBP6.77□□□□□ -1.33
DDB1-210ENST00000538129 SLC7A3Q8WY07 619 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 FRMD6Q96NE9 622 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 WDR11Q9BZH6 1224 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 SOX17Q9H6I2 414 aaPredicted RBP6.77□□□□□ -1.33
DDB1-210ENST00000538129 ORC3Q9UBD5 711 aaPredicted RBP6.77□□□□□ -1.33
DDB1-210ENST00000538129 ZHX1Q9UKY1 873 aaPredicted RBP6.77□□□□□ -1.33
DDB1-210ENST00000538129 PCDHA6Q9UN73 950 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 SOX13Q9UN79 622 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 PCDHA8Q9Y5H6 950 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 PDE4DIPQ5VU43 2346 aa6.77□□□□□ -1.33
DDB1-210ENST00000538129 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 MYH7BA7E2Y1 1941 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 NKRFO15226 690 aaKnown RBP eCLIP6.76□□□□□ -1.33
DDB1-210ENST00000538129 MAFGO15525 162 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 MYCLP12524 364 aaPredicted RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 SELPP16109 830 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 CCND2P30279 289 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 ADCYAP1R1P41586 468 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 CHRNA4P43681 627 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 SOX10P56693 466 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 ADGRE1Q14246 886 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 DSC3Q14574 896 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 TTLL4Q14679 1199 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 ENOX2Q16206 610 aaKnown RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 DUOXA2Q1HG44 320 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 DUSP28Q4G0W2 176 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 PCNX4Q63HM2 1172 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 CCDC62Q6P9F0 684 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 EEPD1Q7L9B9 569 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 RNF180Q86T96 592 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 FBXO16Q8IX29 292 aaPredicted RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 REXO1Q8N1G1 1221 aaKnown RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 NSUN7Q8NE18 718 aaKnown RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 TMX3Q96JJ7 454 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 SPOCK3Q9BQ16 436 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 AP5M1Q9H0R1 490 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 CLEC4MQ9H2X3 399 aaPredicted RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 AKTIPQ9H8T0 292 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 EHMT1Q9H9B1 1298 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 SPC25Q9HBM1 224 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 XPNPEP3Q9NQH7 507 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 PDGFCQ9NRA1 345 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 LATS2Q9NRM7 1088 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 VPS54Q9P1Q0 977 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 DDX41Q9UJV9 622 aaKnown RBP6.76□□□□□ -1.33
DDB1-210ENST00000538129 PCDHA4Q9UN74 947 aa6.76□□□□□ -1.33
DDB1-210ENST00000538129 CEP290O15078 2479 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 DNM1LO00429 736 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 ADAMTS4O75173 837 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 TXNP10599 105 aaKnown RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 ACPPP15309 386 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 ICAM3P32942 547 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 SREBF1P36956 1147 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 USP11P51784 963 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 GJA9P57773 515 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 MRPS9P82933 396 aaKnown RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 HMGN5P82970 282 aaKnown RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 ST3GAL1Q11201 340 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 TRIM29Q14134 588 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 UBE2SQ16763 222 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 GNPTABQ3T906 1256 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 JAKMIP3Q5VZ66 844 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 ANO1Q5XXA6 986 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 TXNDC11Q6PKC3 985 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 DTHD1Q6ZMT9 781 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 SEPT14Q6ZU15 432 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 NECAB2Q7Z6G3 386 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 UBE2Q1Q7Z7E8 422 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 NLRX1Q86UT6 975 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 CCDC83Q8IWF9 413 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 BLIDQ8IZY5 108 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 PCSK9Q8NBP7 692 aaKnown RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 DAGLBQ8NCG7 672 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 KLHDC9Q8NEP7 349 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 SHISA4Q96DD7 197 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 CDHR1Q96JP9 859 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 INPP4AQ96PE3 977 aaPredicted RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 ALG1Q9BT22 464 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 PHF20Q9BVI0 1012 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 CEP41Q9BYV8 373 aa6.75□□□□□ -1.33
DDB1-210ENST00000538129 UPF3AQ9H1J1 476 aaKnown RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 DDX49Q9Y6V7 483 aaKnown RBP6.75□□□□□ -1.33
DDB1-210ENST00000538129 MKI67P46013 3256 aaKnown RBP6.74□□□□□ -1.33
DDB1-210ENST00000538129 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.74□□□□□ -1.33
DDB1-210ENST00000538129 MEIS1O00470 390 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms