RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 MYBL2P10244 700 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 LMNB1P20700 586 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 CXCR5P32302 372 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 DLG4P78352 724 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 TCEAL1Q15170 157 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 XXYLT1Q8NBI6 393 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 ACAD9Q9H845 621 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 POLR2AP24928 1970 aaKnown RBP10.12□□□□□ -0.79
UBE3B-207ENST00000537063 IGSF9BQ9UPX0 1349 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 ZNF862O60290 1169 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 EIF3JO75822 258 aaKnown RBP10.12□□□□□ -0.79
UBE3B-207ENST00000537063 KRT13P13646 458 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 PPP3CAQ08209 521 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 PLA2G4FQ68DD2 849 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 GPC2Q8N158 579 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 KIFAP3Q92845 792 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 CDHR1Q96JP9 859 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 FBXL18Q96ME1 805 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 LRRC1Q9BTT6 524 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 GPRC5CQ9NQ84 441 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 A1CFQ9NQ94 594 aaKnown RBP10.12□□□□□ -0.79
UBE3B-207ENST00000537063 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
UBE3B-207ENST00000537063 EHD2Q9NZN4 543 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 EMSYQ7Z589 1322 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 SPATA31C2B4DYI2 1134 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 H2AFZP0C0S5 128 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 TMEM253P0C7T8 217 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 ADSSP30520 456 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 PAFAH1B1P43034 410 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 XKR9Q5GH70 373 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 CCDC70Q6NSX1 233 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 H2AFVQ71UI9 128 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 SMARCAL1Q9NZC9 954 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 HPCAL4Q9UM19 191 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 TBX20Q9UMR3 447 aa10.12□□□□□ -0.79
UBE3B-207ENST00000537063 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 SLC16A4O15374 487 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 DKC1O60832 514 aaKnown RBP eCLIP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 KIF4AO95239 1232 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ADRB2P07550 413 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 CCDC172P0C7W6 258 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ICAM3P32942 547 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 NPTX2P47972 431 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ENOX2Q16206 610 aaKnown RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 CCDC181Q5TID7 509 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ABHD15Q6UXT9 468 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 MAEAQ7L5Y9 396 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 BSNDQ8WZ55 320 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PDE11AQ9HCR9 933 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 GGA3Q9NZ52 723 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 TCEAL9Q9UHQ7 104 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PRDM4Q9UKN5 801 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 EXOC7Q9UPT5 735 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 MYH9P35579 1960 aaKnown RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 CLSTN1O94985 981 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 HADHBP55084 474 aaKnown RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PEX3P56589 373 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ZSWIM2Q8NEG5 633 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ACTRT1Q8TDG2 376 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 HDAC7Q8WUI4 952 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ATP6V0A1Q93050 837 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PBKQ96KB5 322 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 STIM2Q9P246 746 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 SUCLA2Q9P2R7 463 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 COQ4Q9Y3A0 265 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 NAP1L1P55209 391 aaKnown RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PLS1Q14651 629 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 SLC39A4Q6P5W5 647 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 OTUD6AQ7L8S5 288 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PSMB7Q99436 277 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 PCIF1Q9H4Z3 704 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 JPH1Q9HDC5 661 aaPredicted RBP10.11□□□□□ -0.79
UBE3B-207ENST00000537063 MED4Q9NPJ6 270 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 FZD1Q9UP38 647 aa10.11□□□□□ -0.79
UBE3B-207ENST00000537063 ANKRD63C9JTQ0 380 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 ATG7O95352 703 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 PSAPP07602 524 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 GALCP54803 685 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 PPATQ06203 517 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 GPS2Q13227 327 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 DMP1Q13316 513 aaPredicted RBP10.1□□□□□ -0.79
UBE3B-207ENST00000537063 FAM102BQ5T8I3 360 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 ARHGEF19Q8IW93 802 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 RASGEF1CQ8N431 466 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 DNERQ8NFT8 737 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 TMC2Q8TDI7 906 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 RFFLQ8WZ73 363 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 CCDC43Q96MW1 224 aaKnown RBP10.1□□□□□ -0.79
UBE3B-207ENST00000537063 SELENOOQ9BVL4 669 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 TMEM117Q9H0C3 514 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 XPNPEP1Q9NQW7 623 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 TMOD4Q9NZQ9 345 aa10.1□□□□□ -0.79
UBE3B-207ENST00000537063 SNCAIPQ9Y6H5 919 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms