RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SH3TC1Q8TE82 1336 aa8.28□□□□□ -1.08
CCDC60-203ENST00000536742 A0A1W2PQ45 241 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-203ENST00000536742 A0A1W2PQY0 241 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 PROB1E7EW31 1015 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 C8AP07357 584 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 PAMP19021 973 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 POU3F3P20264 500 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-203ENST00000536742 SCRN1Q12765 414 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 NSMFQ6X4W1 530 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-203ENST00000536742 CDC6Q99741 560 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 MCMBPQ9BTE3 642 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 G6PC3Q9BUM1 346 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 ADAMTS10Q9H324 1103 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 PLXNA1Q9UIW2 1896 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 COL4A1P02462 1669 aa8.27□□□□□ -1.09
CCDC60-203ENST00000536742 CHD9Q3L8U1 2897 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 CLRN2A0PK11 232 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 TBX1O43435 398 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 CYP2C8P10632 490 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 PABPC1P11940 636 aaKnown RBP8.26□□□□□ -1.09
CCDC60-203ENST00000536742 IL13P35225 146 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 SUMO1P63165 101 aaKnown RBP8.26□□□□□ -1.09
CCDC60-203ENST00000536742 TCF15Q12870 199 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 KCNAB2Q13303 367 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 SNX17Q15036 470 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 SF3B3Q15393 1217 aaKnown RBP8.26□□□□□ -1.09
CCDC60-203ENST00000536742 RALGPS1Q5JS13 557 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 TTLL5Q6EMB2 1281 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 LILRB2Q8N423 598 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 ATOH1Q92858 354 aaPredicted RBP8.26□□□□□ -1.09
CCDC60-203ENST00000536742 MMP19Q99542 508 aa8.26□□□□□ -1.09
CCDC60-203ENST00000536742 TRMT112Q9UI30 125 aaKnown RBP8.26□□□□□ -1.09
CCDC60-203ENST00000536742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
CCDC60-203ENST00000536742 DOCK3Q8IZD9 2030 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 ACACBO00763 2458 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 RPAP1Q9BWH6 1393 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-203ENST00000536742 FASNP49327 2511 aaKnown RBP8.25□□□□□ -1.09
CCDC60-203ENST00000536742 TLDC2A0PJX2 215 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 FADS2P1A8MWK0 482 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 HPXP02790 462 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 AFMP43652 599 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 KCNJ6P48051 423 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 CORO7P57737 925 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 FPGSQ05932 587 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 FZD5Q13467 585 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 SLC35F1Q5T1Q4 408 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 ZNF648Q5T619 568 aaPredicted RBP8.25□□□□□ -1.09
CCDC60-203ENST00000536742 NPLOC4Q8TAT6 608 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 ANKS1AQ92625 1134 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 IER2Q9BTL4 223 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 DHRS4Q9BTZ2 278 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 COA1Q9GZY4 146 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 PDLIM7Q9NR12 457 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 TMEM260Q9NX78 707 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 CTNND2Q9UQB3 1225 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 XDHP47989 1333 aa8.25□□□□□ -1.09
CCDC60-203ENST00000536742 MYBBP1AQ9BQG0 1328 aaKnown RBP8.25□□□□□ -1.09
CCDC60-203ENST00000536742 CEMIPQ8WUJ3 1361 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 TRANK1O15050 2925 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 TRBV23-1A0A0A0MS06 115 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 NPHP3-ACAD11A0A0J9YXS1 232 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 TRIM43BA6NCK2 446 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 DNM1LO00429 736 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 PRODHO43272 600 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 THBDP07204 575 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 FAM153BP0C7A2 387 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 EPHB4P54760 987 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 KCNMB1Q16558 191 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 HSP90AB3PQ58FF7 597 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 CCDC174Q6PII3 467 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 RSPO2Q6UXX9 243 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-203ENST00000536742 SLC39A5Q6ZMH5 540 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 BMP8AQ7Z5Y6 402 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 ZSWIM9Q86XI8 627 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 TRIB2Q92519 343 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 OSBP2Q969R2 916 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 TRIM43Q96BQ3 446 aaPredicted RBP8.24□□□□□ -1.09
CCDC60-203ENST00000536742 HOOK2Q96ED9 719 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 LGR4Q9BXB1 951 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 RRP7AQ9Y3A4 280 aaKnown RBP8.24□□□□□ -1.09
CCDC60-203ENST00000536742 GPR179Q6PRD1 2367 aa8.24□□□□□ -1.09
CCDC60-203ENST00000536742 MEFVO15553 781 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-203ENST00000536742 NRDCO43847 1150 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 DLX3O60479 287 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 HMOX1P09601 288 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 GRIA2P42262 883 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 SLC14A2Q15849 920 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 GALNT18Q6P9A2 607 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 ASCL5Q7RTU5 278 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 SLCO6A1Q86UG4 719 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 HOMER1Q86YM7 354 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 TMEM145Q8NBT3 493 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 SMCR8Q8TEV9 937 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-203ENST00000536742 FRS2Q8WU20 508 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 C1orf159Q96HA4 380 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 PRMT6Q96LA8 375 aaPredicted RBP8.23□□□□□ -1.09
CCDC60-203ENST00000536742 TEPSINQ96N21 525 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 WRNIP1Q96S55 665 aa8.23□□□□□ -1.09
CCDC60-203ENST00000536742 SLC38A3Q99624 504 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms