RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 ERC2O15083 957 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 NKRFO15226 690 aaKnown RBP eCLIP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 SRGAP3O43295 1099 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 NEMFO60524 1076 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 COQ9O75208 318 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 GLRX3O76003 335 aaKnown RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 NEBLO76041 1014 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 LARGE1O95461 756 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 MYBL2P10244 700 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 SYT1P21579 422 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 SLC6A11P48066 632 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 MAPKAPK2P49137 400 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 KPNA1P52294 538 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 EIF5P55010 431 aaKnown RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 IGBP1P78318 339 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 IRF9Q00978 393 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 ADCY2Q08462 1091 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 TARBP2Q15633 366 aaKnown RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PTPROQ16827 1216 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 ARHGAP44Q17R89 818 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 KRT24Q2M2I5 525 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 TBC1D25Q3MII6 688 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PLEKHN1Q494U1 663 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 BEND6Q5SZJ8 279 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 C1QTNF12Q5T7M4 302 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 VPS53Q5VIR6 699 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 BTBD8Q5XKL5 378 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 FAM173BQ6P4H8 233 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PKN3Q6P5Z2 889 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 CD300LDQ6UXZ3 194 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 ETV3LQ6ZN32 361 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 KCTD1Q719H9 257 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 OTOP3Q7RTS5 596 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 RBM12BQ8IXT5 1001 aaKnown RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 TEX11Q8IYF3 940 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 OTUD6BQ8N6M0 293 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 CHST14Q8NCH0 376 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 CNNM3Q8NE01 707 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PHOSPHO1Q8TCT1 267 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 ZNF483Q8TF39 744 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 KCNN1Q92952 543 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 ZKSCAN4Q969J2 545 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PGBD1Q96JS3 809 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 TTC14Q96N46 770 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 GPR101Q96P66 508 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 PLEKHF1Q96S99 279 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 TTC1Q99614 292 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 UPF3BQ9BZI7 483 aaKnown RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 CD244Q9BZW8 370 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 OSBPL5Q9H0X9 879 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-216ENST00000534389 IL25Q9H293 177 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 CLSTN2Q9H4D0 955 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 CD248Q9HCU0 757 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 VPS18Q9P253 973 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 ARHGAP28Q9P2N2 729 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 IQGAP1P46940 1657 aa3.61□□□□□ -1.83
CSDE1-216ENST00000534389 SYNJ2O15056 1496 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 MYOM2P54296 1465 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 ZNF518AQ6AHZ1 1483 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 ABCA10Q8WWZ4 1543 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 ANKRD18BA2A2Z9 1011 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 EFCAB8A8MWE9 144 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 H0YHG0 523 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 IPO8O15397 1037 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 STX6O43752 255 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 PRPF6O94906 941 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 PAPLNO95428 1278 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 TMEM253P0C7T8 217 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 GCFC2P16383 781 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 ITGB5P18084 799 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 VIPR1P32241 457 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 STAT3P40763 770 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 TMPOP42166 694 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 MCM2P49736 904 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 MNAT1P51948 309 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 KIF11P52732 1056 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 MRPL12P52815 198 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 JAM2P57087 298 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 NKX3-2P78367 333 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 IRX1P78414 480 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 SARNPP82979 210 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 OS9Q13438 667 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 TUSC3Q13454 348 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 SNX1Q13596 522 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 WLSQ5T9L3 541 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 IQSEC1Q6DN90 963 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 CYP4F22Q6NT55 531 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 LEKR1Q6ZMV7 388 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 PRR23BQ6ZRT6 265 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 HDGFL2Q7Z4V5 671 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 FAM228AQ86W67 206 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 DHX40Q8IX18 779 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 NXPE1Q8N323 547 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 MSL3Q8N5Y2 521 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 FBXO15Q8NCQ5 510 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 HIPK4Q8NE63 616 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 DNAAF4Q8WXU2 420 aa3.6□□□□□ -1.83
CSDE1-216ENST00000534389 THOC1Q96FV9 657 aaKnown RBP3.6□□□□□ -1.83
CSDE1-216ENST00000534389 TOE1Q96GM8 510 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms