RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 SFPQP23246 707 aaKnown RBP eCLIP23.59■■□□□ 1.37
FDFT1-220ENST00000531733 PSMA5P28066 241 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 NPEPPSP55786 919 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 ITIH3Q06033 890 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 CES5AQ6NT32 575 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 RUFY3Q7L099 469 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 ZNF280BQ86YH2 543 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 SLC22A17Q8WUG5 538 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 RIPOR3Q96MK2 946 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 NLRP4Q96MN2 994 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 FAM105AQ9NUU6 356 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 WRAP73Q9P2S5 460 aaPredicted RBP23.59■■□□□ 1.37
FDFT1-220ENST00000531733 NR2E1Q9Y466 385 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 CACNA1HO95180 2353 aa23.59■■□□□ 1.37
FDFT1-220ENST00000531733 ASGR2P07307 311 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 CTSAP10619 480 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 SLC11A1P49279 550 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 INF2Q27J81 1249 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 NOMO2Q5JPE7 1267 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 DDX53Q86TM3 631 aaKnown RBP23.58■■□□□ 1.37
FDFT1-220ENST00000531733 ZNF410Q86VK4 478 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 DAGLBQ8NCG7 672 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 PRRX2Q99811 253 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 GBP3Q9H0R5 595 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 IFT122Q9HBG6 1241 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 ZSWIM6Q9HCJ5 1215 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 DMDP11532 3685 aa23.58■■□□□ 1.37
FDFT1-220ENST00000531733 DNM2P50570 870 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 STK3Q13188 491 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 CATSPER4Q7RTX7 472 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 TRIM22Q8IYM9 498 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 NECTIN4Q96NY8 510 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 MINDY3Q9H8M7 445 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 DDX25Q9UHL0 483 aaKnown RBP23.57■■□□□ 1.36
FDFT1-220ENST00000531733 VAV3Q9UKW4 847 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 KCNJ14Q9UNX9 436 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 SORCS3Q9UPU3 1222 aa23.57■■□□□ 1.36
FDFT1-220ENST00000531733 ZNF623O75123 536 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 DEXIO95424 95 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 MTHFRP42898 656 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 PSMC5P62195 406 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 CDC42EP1Q00587 391 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 MTMR3Q13615 1198 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 MOXD1Q6UVY6 613 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 GLB1LQ6UWU2 654 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 AGMOQ6ZNB7 445 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 C22orf23Q9BZE7 217 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 CYP26B1Q9NR63 512 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 BMP2KQ9NSY1 1161 aaPredicted RBP23.56■■□□□ 1.36
FDFT1-220ENST00000531733 IRAK3Q9Y616 596 aa23.56■■□□□ 1.36
FDFT1-220ENST00000531733 ZFHX2Q9C0A1 2572 aaPredicted RBP23.56■■□□□ 1.36
FDFT1-220ENST00000531733 H0Y858 1186 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 DDHD2O94830 711 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 NONOQ15233 471 aaKnown RBP eCLIP23.55■■□□□ 1.368e-9■■□□□ 11.7
FDFT1-220ENST00000531733 PTPN14Q15678 1187 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 KIAA1841Q6NSI8 718 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 TMC5Q6UXY8 1006 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 GJB4Q9NTQ9 266 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 AGPAT5Q9NUQ2 364 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 LIMD1Q9UGP4 676 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 PCDHB2Q9Y5E7 798 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 DENND4AQ7Z401 1863 aa23.55■■□□□ 1.36
FDFT1-220ENST00000531733 VPS13AQ96RL7 3174 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 PLXNA3P51805 1871 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 POLGP54098 1239 aaPredicted RBP23.54■■□□□ 1.36
FDFT1-220ENST00000531733 RNASELQ05823 741 aaKnown RBP23.54■■□□□ 1.36
FDFT1-220ENST00000531733 LETM2Q2VYF4 491 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 UBXN11Q5T124 520 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 TMEM105Q8N8V8 129 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 TMEM143Q96AN5 459 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 INO80BQ9C086 356 aaPredicted RBP23.54■■□□□ 1.36
FDFT1-220ENST00000531733 DZANK1Q9NVP4 752 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 COL4A3BPQ9Y5P4 624 aa23.54■■□□□ 1.36
FDFT1-220ENST00000531733 CPLX1O14810 134 aa23.53■■□□□ 1.36
FDFT1-220ENST00000531733 REC8O95072 547 aa23.53■■□□□ 1.36
FDFT1-220ENST00000531733 SSBP05455 408 aaKnown RBP eCLIP23.53■■□□□ 1.36
FDFT1-220ENST00000531733 SKIP12755 728 aa23.53■■□□□ 1.36
FDFT1-220ENST00000531733 HOXA11P31270 313 aaPredicted RBP23.53■■□□□ 1.36
FDFT1-220ENST00000531733 PPP2R5CQ13362 524 aa23.53■■□□□ 1.36
FDFT1-220ENST00000531733 UBALD2Q8IYN6 164 aa23.53■■□□□ 1.36
FDFT1-220ENST00000531733 TDRD5Q8NAT2 981 aaKnown RBP23.53■■□□□ 1.36
FDFT1-220ENST00000531733 ATOH1Q92858 354 aaPredicted RBP23.53■■□□□ 1.36
FDFT1-220ENST00000531733 ZNF274Q96GC6 653 aaPredicted RBP23.53■■□□□ 1.36
FDFT1-220ENST00000531733 KCNMB3Q9NPA1 279 aa23.53■■□□□ 1.36
FDFT1-220ENST00000531733 DBR1Q9UK59 544 aaKnown RBP23.53■■□□□ 1.36
FDFT1-220ENST00000531733 QARSP47897 775 aaKnown RBP23.52■■□□□ 1.36
FDFT1-220ENST00000531733 RAB27AP51159 221 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 ATAT1Q5SQI0 421 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 MRPL10Q7Z7H8 261 aaKnown RBP23.52■■□□□ 1.36
FDFT1-220ENST00000531733 ZDHHC14Q8IZN3 488 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 OXER1Q8TDS5 423 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 PRPF31Q8WWY3 499 aaKnown RBP23.52■■□□□ 1.36
FDFT1-220ENST00000531733 HAS1Q92839 578 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 PHF20Q9BVI0 1012 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 DHX33Q9H6R0 707 aaKnown RBP23.52■■□□□ 1.36
FDFT1-220ENST00000531733 CYP46A1Q9Y6A2 500 aa23.52■■□□□ 1.36
FDFT1-220ENST00000531733 C2orf16Q68DN1 1984 aa23.51■■□□□ 1.35
FDFT1-220ENST00000531733 ZBTB39O15060 712 aa23.51■■□□□ 1.35
FDFT1-220ENST00000531733 LILRB3O75022 631 aa23.51■■□□□ 1.35
FDFT1-220ENST00000531733 SRGAP2CP0DJJ0 459 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms