RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 TTC3P53804 2025 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 RBAK-RBAKDNI3L0D1 243 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 ZNF623O75123 536 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 U2AF2P26368 475 aaKnown RBP eCLIP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 RPA1P27694 616 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 RARRES1P49788 294 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 NDUFV1P49821 464 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 TMEM132AQ24JP5 1023 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 RILPL1Q5EBL4 403 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 NOTUMQ6P988 496 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 KCNT2Q6UVM3 1135 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 ZBTB8OSQ8IWT0 167 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 HELQQ8TDG4 1101 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 PIGOQ8TEQ8 1089 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 MRPS27Q92552 414 aaKnown RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 CDCA3Q99618 268 aaPredicted RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 IFT122Q9HBG6 1241 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 NGRNQ9NPE2 291 aaKnown RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 DAXXQ9UER7 740 aaPredicted RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 LRWD1Q9UFC0 647 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 DBR1Q9UK59 544 aaKnown RBP13.97□□□□□ -0.17
C11orf54-210ENST00000531516 PTPRSQ13332 1948 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 SIP14410 1827 aa13.97□□□□□ -0.17
C11orf54-210ENST00000531516 CNTNAP2Q9UHC6 1331 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 NR1I2O75469 434 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 CCT6AP40227 531 aaKnown RBP13.96□□□□□ -0.17
C11orf54-210ENST00000531516 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.17
C11orf54-210ENST00000531516 PTENP60484 403 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 PLCB3Q01970 1234 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 PDIA5Q14554 519 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 PPP2R5AQ15172 486 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 KRT79Q5XKE5 535 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 TMC7Q7Z402 723 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 CATSPER3Q86XQ3 398 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 TBC1D32Q96NH3 1257 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 C2orf40Q9H1Z8 148 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 INPP5FQ9Y2H2 1132 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 PCDHB2Q9Y5E7 798 aa13.96□□□□□ -0.17
C11orf54-210ENST00000531516 CUL9Q8IWT3 2517 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 LRRIQ4A6NIV6 560 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 H3BQ06 376 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-210ENST00000531516 ZBTB39O15060 712 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 GJB2P29033 226 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 SSTR3P32745 418 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-210ENST00000531516 CA8P35219 290 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 NRIP1P48552 1158 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 HYAL1Q12794 435 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 PTGDRQ13258 359 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 ZNF598Q86UK7 904 aaKnown RBP13.95□□□□□ -0.18
C11orf54-210ENST00000531516 IFT74Q96LB3 600 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
C11orf54-210ENST00000531516 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-210ENST00000531516 CWH43Q9H720 699 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
C11orf54-210ENST00000531516 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
C11orf54-210ENST00000531516 WNT7AO00755 349 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 ZC3H11AO75152 810 aaKnown RBP eCLIP13.94□□□□□ -0.18
C11orf54-210ENST00000531516 ITGA4P13612 1032 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 PDCP20941 246 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 ARL2P36404 184 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 PRPHP41219 470 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 GIT2Q14161 759 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
C11orf54-210ENST00000531516 CLLU1OSQ5K130 101 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
C11orf54-210ENST00000531516 PADI6Q6TGC4 694 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 MAEAQ7L5Y9 396 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 APBB1IPQ7Z5R6 666 aaPredicted RBP13.94□□□□□ -0.18
C11orf54-210ENST00000531516 RBM23Q86U06 439 aaKnown RBP13.94□□□□□ -0.18
C11orf54-210ENST00000531516 EFHBQ8N7U6 833 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 DEPTORQ8TB45 409 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 TCF25Q9BQ70 676 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 PRMT7Q9NVM4 692 aaPredicted RBP13.94□□□□□ -0.18
C11orf54-210ENST00000531516 PRKAG3Q9UGI9 489 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 CD207Q9UJ71 328 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
C11orf54-210ENST00000531516 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 MED24O75448 989 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 SPATA31C1P0DKV0 1188 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 BCAR1P56945 870 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 CAPSQ13938 189 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 COL19A1Q14993 1142 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 CTC1Q2NKJ3 1217 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 LONRF3Q496Y0 759 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 POTEGQ6S5H5 508 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
C11orf54-210ENST00000531516 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
C11orf54-210ENST00000531516 KIFAP3Q92845 792 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 LPPQ93052 612 aa13.93□□□□□ -0.18
C11orf54-210ENST00000531516 CDK5RAP3Q96JB5 506 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms