RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GUCY1A3Q02108 690 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 PKN3Q6P5Z2 889 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 COPS6Q7L5N1 327 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 FERMT3Q86UX7 667 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 KSR1Q8IVT5 923 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 PPM1EQ8WY54 764 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 COA7Q96BR5 231 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 THUMPD2Q9BTF0 503 aaKnown RBP8.56□□□□□ -1.04
SVIP-204ENST00000530199 ISCA1Q9BUE6 129 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 GPR27Q9NS67 375 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 CLEC1BQ9P126 229 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 TCFL5Q9UL49 500 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 PCDHA8Q9Y5H6 950 aa8.56□□□□□ -1.04
SVIP-204ENST00000530199 C5orf42Q9H799 3197 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 ZDBF2Q9HCK1 2354 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 ARAP2Q8WZ64 1704 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 REV3LO60673 3130 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 B4E1Z4 1266 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 MARCH6O60337 910 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 KPNA6O60684 536 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 EYA4O95677 639 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 CYP2C8P10632 490 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 LTBRP36941 435 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 GPR85P60893 370 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 FKBP1AP62942 108 aaKnown RBP8.55□□□□□ -1.04
SVIP-204ENST00000530199 DCTN1Q14203 1278 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 CPSF6Q16630 551 aaKnown RBP eCLIP8.55□□□□□ -1.04
SVIP-204ENST00000530199 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 CERS5Q8N5B7 392 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.55□□□□□ -1.04
SVIP-204ENST00000530199 UBE2FQ969M7 185 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 FOXP3Q9BZS1 431 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 LRRC4CQ9HCJ2 640 aa8.55□□□□□ -1.04
SVIP-204ENST00000530199 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 SSU72P8A0A1W2PR75 194 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 GSC2O15499 205 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 IGLV1-40P01703 118 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 APPP05067 770 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 PRKAR2BP31323 418 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 CCT4P50991 539 aaKnown RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 KCNAB2Q13303 367 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 DHCR24Q15392 516 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 SEPT7Q16181 437 aaKnown RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 PROSER3Q2NL68 480 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 WWC2Q6AWC2 1192 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 IQCEQ6IPM2 695 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 ZCCHC8Q6NZY4 707 aaKnown RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 RNF111Q6ZNA4 994 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 UBE2R2Q712K3 238 aaPredicted RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 MTDHQ86UE4 582 aaKnown RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 ANKRD18AQ8IVF6 992 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 ATL2Q8NHH9 583 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.54□□□□□ -1.04
SVIP-204ENST00000530199 ZKSCAN4Q969J2 545 aaPredicted RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 WRNIP1Q96S55 665 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 ZNF70Q9UC06 446 aaPredicted RBP8.54□□□□□ -1.04
SVIP-204ENST00000530199 CHD9Q3L8U1 2897 aa8.54□□□□□ -1.04
SVIP-204ENST00000530199 DOCK3Q8IZD9 2030 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 ALG1L2C9J202 215 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 ARVCFO00192 962 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 FGF10O15520 208 aaPredicted RBP8.53□□□□□ -1.04
SVIP-204ENST00000530199 S100BP04271 92 aaPredicted RBP8.53□□□□□ -1.04
SVIP-204ENST00000530199 LCP1P13796 627 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 CPEP16870 476 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 PAMP19021 973 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 PMLP29590 882 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 CCDC152Q4G0S7 254 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 CDCA2Q69YH5 1023 aaPredicted RBP8.53□□□□□ -1.04
SVIP-204ENST00000530199 ABHD17CQ6PCB6 329 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 DIO2Q92813 273 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 MMP19Q99542 508 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 TMEM39BQ9GZU3 492 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 DUSP13Q9UII6 198 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 SLC45A1Q9Y2W3 748 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 ZFHX4Q86UP3 3567 aa8.53□□□□□ -1.04
SVIP-204ENST00000530199 PKD1L2Q7Z442 2459 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 CXCL11O14625 94 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 ERC2O15083 957 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 MSCO60682 206 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 FSTP19883 344 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 KCNQ1P51787 676 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 STRN3Q13033 797 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 IFI16Q16666 785 aaKnown RBP8.52□□□□□ -1.05
SVIP-204ENST00000530199 BRDTQ58F21 947 aaPredicted RBP8.52□□□□□ -1.05
SVIP-204ENST00000530199 LBX2Q6XYB7 198 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 TMPRSS7Q7RTY8 843 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 PLD6Q8N2A8 252 aaKnown RBP8.52□□□□□ -1.05
SVIP-204ENST00000530199 RCBTB1Q8NDN9 531 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 NETO1Q8TDF5 533 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 BADQ92934 168 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 TIFAQ96CG3 184 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 PTCHD1Q96NR3 888 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 BSDC1Q9NW68 430 aaPredicted RBP8.52□□□□□ -1.05
SVIP-204ENST00000530199 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms