RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PRPF3O43395 683 aaKnown RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 GGPS1O95749 300 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 HOXD8P13378 290 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 GMPRP36959 345 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 NAPAP54920 295 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 CCT2P78371 535 aaKnown RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 DUSP6Q16828 381 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 PFKFB3Q16875 520 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 HSDL1Q3SXM5 330 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 XRRA1Q6P2D8 792 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 GPIHBP1Q8IV16 184 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 TEX2Q8IWB9 1127 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 DHX37Q8IY37 1157 aaKnown RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 ZNF713Q8N859 430 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 PPTC7Q8NI37 304 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 PHKBQ93100 1093 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 ZNF274Q96GC6 653 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 CDCA3Q99618 268 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 TLE6Q9H808 572 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 NCOA5Q9HCD5 579 aaKnown RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 PCDHA6Q9UN73 950 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 PCDHA8Q9Y5H6 950 aa9.65□□□□□ -0.86
SSBP3-212ENST00000528930 FNDC1Q4ZHG4 1894 aaPredicted RBP9.65□□□□□ -0.86
SSBP3-212ENST00000528930 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-212ENST00000528930 SMCO2A6NFE2 343 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 SPDYE3A6NKU9 549 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 HAS3O00219 553 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 ADAMTS3O15072 1205 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 FIBPO43427 364 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 SORBS3O60504 671 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 LILRB5O75023 590 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 PPFIA4O75335 1185 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 SCG2P13521 617 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 IFNAR1P17181 557 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 ITGB5P18084 799 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 ANAPC15P60006 121 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 PTK7Q13308 1070 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 DGKDQ16760 1214 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 GNPTABQ3T906 1256 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 ZBTB44Q8NCP5 570 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 POF1BQ8WVV4 589 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 ZNF689Q96CS4 500 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-212ENST00000528930 NECTIN4Q96NY8 510 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 SENP7Q9BQF6 1050 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 RNF26Q9BY78 433 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-212ENST00000528930 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 GTF2IRD1Q9UHL9 959 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 CDH22Q9UJ99 828 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 TELO2Q9Y4R8 837 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 PCDHGA2Q9Y5H1 932 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 UBIAD1Q9Y5Z9 338 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 DOCK5Q9H7D0 1870 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
SSBP3-212ENST00000528930 ESYT2A0FGR8 921 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 KRBA1A5PL33 1030 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 ATP9AO75110 1047 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 F2P00734 622 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 SRGAP2BP0DMP2 458 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 HOXB8P17481 243 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-212ENST00000528930 RBM25P49756 843 aaKnown RBP9.63□□□□□ -0.87
SSBP3-212ENST00000528930 ADCY7P51828 1080 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 NEDD9Q14511 834 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 CYFIP1Q7L576 1253 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 NLRX1Q86UT6 975 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 TDRD5Q8NAT2 981 aaKnown RBP9.63□□□□□ -0.87
SSBP3-212ENST00000528930 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 CRYGNQ8WXF5 182 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 GPRASP2Q96D09 838 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 PGBD1Q96JS3 809 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 SPATA33Q96N06 139 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 HNRNPABQ99729 332 aaKnown RBP9.63□□□□□ -0.87
SSBP3-212ENST00000528930 C16orf70Q9BSU1 422 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 ZMYND12Q9H0C1 365 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 MLXIPQ9HAP2 919 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 TMEM260Q9NX78 707 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 WASF3Q9UPY6 502 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 DOCK8Q8NF50 2099 aa9.63□□□□□ -0.87
SSBP3-212ENST00000528930 TM4SF5O14894 197 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 PER2O15055 1255 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 LRP3O75074 770 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 FOSP01100 380 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-212ENST00000528930 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 KCNA2P16389 499 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 TECP42680 631 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 WNT7BP56706 349 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 AP3B2Q13367 1082 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 TDGQ13569 410 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 KIAA0753Q2KHM9 967 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 C8orf34Q49A92 452 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 TRIM46Q7Z4K8 759 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 KLHL23Q8NBE8 558 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 SEPT8Q92599 483 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 NELL1Q92832 810 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 GATA6Q92908 595 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 GPR20Q99678 358 aa9.62□□□□□ -0.87
SSBP3-212ENST00000528930 MXRA8Q9BRK3 442 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms