RNA–Protein interactions for RNA: ENST00000526149.1

CKLF-206, Transcript of chemokine like factor, humanhuman

TSL 2

Gene CKLF, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-206ENST00000526149 RUSC1Q9BVN2 902 aa24.82■■□□□ 1.56
CKLF-206ENST00000526149 CSRNP2Q9H175 543 aa24.82■■□□□ 1.56
CKLF-206ENST00000526149 RNF216Q9NWF9 866 aaPredicted RBP24.82■■□□□ 1.56
CKLF-206ENST00000526149 SRPRBQ9Y5M8 271 aaKnown RBP24.82■■□□□ 1.56
CKLF-206ENST00000526149 MORC2Q9Y6X9 1032 aaPredicted RBP24.82■■□□□ 1.56
CKLF-206ENST00000526149 TRANK1O15050 2925 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 TBKBP1A7MCY6 615 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 INO80B-WBP1J3KQ70 363 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 ZSCAN22P10073 491 aaPredicted RBP24.81■■□□□ 1.56
CKLF-206ENST00000526149 BMPR1AP36894 532 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 SLC39A14Q15043 492 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 CDCA2Q69YH5 1023 aaPredicted RBP24.81■■□□□ 1.56
CKLF-206ENST00000526149 TWF2Q6IBS0 349 aaKnown RBP24.81■■□□□ 1.56
CKLF-206ENST00000526149 KCTD17Q8N5Z5 321 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 CLIC6Q96NY7 704 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 CASD1Q96PB1 797 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 NT5C3AQ9H0P0 336 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 HCSTQ9UBK5 93 aa24.81■■□□□ 1.56
CKLF-206ENST00000526149 LRRIQ4A6NIV6 560 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 C5orf67F2Z3F1 127 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 SLC26A4O43511 780 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 EOMESO95936 686 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 UBA7P41226 1012 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 NASPP49321 788 aaPredicted RBP24.8■■□□□ 1.56
CKLF-206ENST00000526149 SLC12A3P55017 1021 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 MAPK7Q13164 816 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 CLLU1OSQ5K130 101 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 SPECC1Q5M775 1068 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 SYT2Q8N9I0 419 aaPredicted RBP24.8■■□□□ 1.56
CKLF-206ENST00000526149 RNF169Q8NCN4 708 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 FAM105AQ9NUU6 356 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 TFIP11Q9UBB9 837 aaKnown RBP24.8■■□□□ 1.56
CKLF-206ENST00000526149 COL4A4P53420 1690 aaPredicted RBP24.8■■□□□ 1.56
CKLF-206ENST00000526149 EYSQ5T1H1 3165 aa24.8■■□□□ 1.56
CKLF-206ENST00000526149 MEIS3P2A8K0S8 358 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 H3BNC9 293 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 B4GALT5O43286 388 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 ZNF623O75123 536 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 F13A1P00488 732 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 PDIA4P13667 645 aaKnown RBP24.79■■□□□ 1.56
CKLF-206ENST00000526149 CTNNB1P35222 781 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 KARSQ15046 597 aaKnown RBP24.79■■□□□ 1.56
CKLF-206ENST00000526149 PCBP1Q15365 356 aaKnown RBP eCLIP24.79■■□□□ 1.56
CKLF-206ENST00000526149 LRRC55Q6ZSA7 311 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 CPB2Q96IY4 423 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 EPSTI1Q96J88 318 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 TMEM117Q9H0C3 514 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 BLOC1S4Q9NUP1 217 aa24.79■■□□□ 1.56
CKLF-206ENST00000526149 HIP1RO75146 1068 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 ERLIN2O94905 339 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 PLA2G4BP0C869 781 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 NAMPTP43490 491 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 LONRF3Q496Y0 759 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 LINC00301Q8NCQ3 95 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 KIFAP3Q92845 792 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 LPPQ93052 612 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 CDK5RAP3Q96JB5 506 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 CCSER1Q9C0I3 900 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 FZD8Q9H461 694 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 CWH43Q9H720 699 aa24.78■■□□□ 1.56
CKLF-206ENST00000526149 TYW1Q9NV66 732 aaKnown RBP24.78■■□□□ 1.56
CKLF-206ENST00000526149 FNDC1Q4ZHG4 1894 aaPredicted RBP24.78■■□□□ 1.56
CKLF-206ENST00000526149 TTLL13PA6NNM8 815 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 RB1P06400 928 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 ARF4P18085 180 aaPredicted RBP24.77■■□□□ 1.56
CKLF-206ENST00000526149 PLCG1P19174 1290 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 GUCY2CP25092 1073 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 AXLP30530 894 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 GPM6BQ13491 265 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 CCDC85BQ15834 202 aaPredicted RBP24.77■■□□□ 1.56
CKLF-206ENST00000526149 ARSHQ5FYA8 562 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 PPP4R3CPQ6ZMV5 832 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 MRPL10Q7Z7H8 261 aaKnown RBP24.77■■□□□ 1.56
CKLF-206ENST00000526149 HELQQ8TDG4 1101 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 PPM1EQ8WY54 764 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 CALML4Q96GE6 196 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 KIFC3Q9BVG8 833 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 EIF2AQ9BY44 585 aaKnown RBP24.77■■□□□ 1.56
CKLF-206ENST00000526149 CCDC113Q9H0I3 377 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 RWDD3Q9Y3V2 267 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 PCDHB2Q9Y5E7 798 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 NLRC5Q86WI3 1866 aa24.77■■□□□ 1.56
CKLF-206ENST00000526149 HOXA2O43364 376 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 EDN1P05305 212 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 SSBP05455 408 aaKnown RBP eCLIP24.76■■□□□ 1.55
CKLF-206ENST00000526149 SKIP12755 728 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 RAB27AP51159 221 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 FAM187BQ17R55 369 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 LMCD1Q9NZU5 365 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 ZDHHC9Q9Y397 364 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 RALGAPA2Q2PPJ7 1873 aa24.76■■□□□ 1.55
CKLF-206ENST00000526149 NPHP3-ACAD11A0A0J9YXS1 232 aa24.75■■□□□ 1.55
CKLF-206ENST00000526149 GTPBP6O43824 516 aaPredicted RBP24.75■■□□□ 1.55
CKLF-206ENST00000526149 PPP2R5AQ15172 486 aa24.75■■□□□ 1.55
CKLF-206ENST00000526149 FOXD4L6Q3SYB3 417 aaPredicted RBP24.75■■□□□ 1.55
CKLF-206ENST00000526149 FOXD4L3Q6VB84 417 aaPredicted RBP24.75■■□□□ 1.55
CKLF-206ENST00000526149 ZBTB8OSQ8IWT0 167 aa24.75■■□□□ 1.55
CKLF-206ENST00000526149 SMG8Q8ND04 991 aaKnown RBP24.75■■□□□ 1.55
CKLF-206ENST00000526149 DEPTORQ8TB45 409 aa24.75■■□□□ 1.55
CKLF-206ENST00000526149 SYMPKQ92797 1274 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms