RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 BCL7CQ8WUZ0 217 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 NELL2Q99435 816 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 ADAM2Q99965 735 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 VN1R3Q9BXE9 311 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 TMEM117Q9H0C3 514 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 PUS7LQ9H0K6 701 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 IL17RBQ9NRM6 502 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 MTMR7Q9Y216 660 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 RAXQ9Y2V3 346 aa8.41□□□□□ -1.06
CTNNA1-227ENST00000521387 WDR19Q8NEZ3 1342 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 NMT2O60551 498 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 LILRB3O75022 631 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 RFPL2O75678 378 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 CNR2P34972 360 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 TFAP4Q01664 338 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 PAK2Q13177 524 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 PPP1R15BQ5SWA1 713 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 ZNF787Q6DD87 383 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 SLC24A5Q71RS6 500 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 STAMQ92783 540 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 ZFRQ96KR1 1074 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 UBL7Q96S82 380 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 CLMPQ9H6B4 373 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 PXMP2Q9NR77 195 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 C2orf42Q9NWW7 574 aa8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-227ENST00000521387 TRIM6-TRIM34B2RNG4 842 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 NCAM2O15394 837 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 CNPP09543 421 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 MYBP10242 640 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 CHMLP26374 656 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 DDIT3P35638 169 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 NOVP48745 357 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 METAP2P50579 478 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 HSP90AB4PQ58FF6 505 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 UTP14CQ5TAP6 766 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 CASC1Q6TDU7 716 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 GET4Q7L5D6 327 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 RSPH3Q86UC2 560 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 PPFIBP1Q86W92 1011 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 LONP2Q86WA8 852 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 DEFB124Q8NES8 71 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 IL31RAQ8NI17 732 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 PI4K2BQ8TCG2 481 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 RILPL2Q969X0 211 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 KIF1BPQ96EK5 621 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 LOXL4Q96JB6 756 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 STRBPQ96SI9 672 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 ESYT1Q9BSJ8 1104 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 EDEM2Q9BV94 578 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 FAM49AQ9H0Q0 323 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 MLXIPQ9HAP2 919 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 ATP6V0A4Q9HBG4 840 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 EPB41L4AQ9HCS5 686 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 TMEM161AQ9NX61 479 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 CHMP5Q9NZZ3 219 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 KIAA1468Q9P260 1216 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 NOC2LQ9Y3T9 749 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 TRPV2Q9Y5S1 764 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 SPAG17Q6Q759 2223 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 NBPF19A0A087WUL8 3843 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 TCHHQ07283 1943 aa8.39□□□□□ -1.07
CTNNA1-227ENST00000521387 KAT6AQ92794 2004 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 PPP1R3GB7ZBB8 358 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CDX4O14627 284 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 ATXN7O15265 892 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 INPPL1O15357 1258 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 TSPY3P0CV98 308 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 TSPY8P0CW00 308 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CXCL12P48061 93 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CCR3P51677 355 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 BCAR1P56945 870 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 NFX1Q12986 1120 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 DSC3Q14574 896 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 RABEP1Q15276 862 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 GRIK4Q16099 956 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CCDC96Q2M329 555 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 USH1GQ495M9 461 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CLLU1OSQ5K130 101 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 ARHGEF16Q5VV41 709 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 HEATR6Q6AI08 1181 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 ZNF852Q6ZMS4 543 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 KBTBD6Q86V97 674 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 VSIG10LQ86VR7 867 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CHCHD4Q8N4Q1 142 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 DCAF4Q8WV16 495 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 TMEM40Q8WWA1 233 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 PDCD2LQ9BRP1 358 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 MKNK1Q9BUB5 465 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 CELF4Q9BZC1 486 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 PRKD2Q9BZL6 878 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 ELAC1Q9H777 363 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 MAN1C1Q9NR34 630 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 HEBP1Q9NRV9 189 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 C1orf112Q9NSG2 853 aa8.38□□□□□ -1.07
CTNNA1-227ENST00000521387 TUBE1Q9UJT0 475 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms