RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 POU4F3Q15319 338 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 BCL2A1Q16548 175 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 PARP6Q2NL67 630 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 TWISTNBQ3B726 338 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 PCNX4Q63HM2 1172 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SCARA3Q6AZY7 606 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 CPLX4Q7Z7G2 160 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 PDZD3Q86UT5 571 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 RNF10Q8N5U6 811 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ENDOVQ8N8Q3 282 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 TRIML1Q8N9V2 468 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SREK1Q8WXA9 508 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 BRF1Q92994 677 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 RRP36Q96EU6 259 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 NR1H4Q96RI1 486 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SEC62Q99442 399 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SYT15Q9BQS2 421 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 DESI2Q9BSY9 194 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 KRT23Q9C075 422 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 CARD9Q9H257 536 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 PLCB1Q9NQ66 1216 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SUCLA2Q9P2R7 463 aaPredicted RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 DKK3Q9UBP4 350 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 CYP8B1Q9UNU6 501 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 R3HDM2Q9Y2K5 976 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 LUC7L2Q9Y383 392 aaKnown RBP9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ATP6V0A2Q9Y487 856 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 CASZ1Q86V15 1759 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
SHPRH-208ENST00000520752 AFF2P51816 1311 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 MROH7Q68CQ1 1323 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 RAPGEF6Q8TEU7 1601 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 CYTH3O43739 400 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 MFAP3LO75121 409 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 GFPT2O94808 682 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 GNAI2P04899 355 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 ATP1A3P13637 1013 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 SEC24CP53992 1094 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 BPIFB4P59827 614 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 TUBA4AP68366 448 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 GPSM2P81274 684 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 ZNF252P-AS1Q0IIN9 211 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 PWP1Q13610 501 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 NECTIN1Q15223 517 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 BLOC1S2Q6QNY1 142 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 PIGWQ7Z7B1 504 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 EXOC3L1Q86VI1 746 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 DZIP1Q86YF9 867 aaKnown RBP9.35□□□□□ -0.91
SHPRH-208ENST00000520752 SLC15A3Q8IY34 581 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 SYT2Q8N9I0 419 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-208ENST00000520752 CAGE1Q8TC20 777 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 STK35Q8TDR2 534 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 CTNNBL1Q8WYA6 563 aaPredicted RBP9.35□□□□□ -0.91
SHPRH-208ENST00000520752 CHMP6Q96FZ7 201 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 TUBGCP5Q96RT8 1024 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 MMS19Q96T76 1030 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 CENPKQ9BS16 269 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 FAM167BQ9BTA0 163 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 FTOQ9C0B1 505 aaKnown RBP eCLIP9.35□□□□□ -0.91
SHPRH-208ENST00000520752 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
SHPRH-208ENST00000520752 PIDD1Q9HB75 910 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 ARHGEF3Q9NR81 526 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 INTS13Q9NVM9 706 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 GGT7Q9UJ14 662 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 PREX1Q8TCU6 1659 aa9.35□□□□□ -0.91
SHPRH-208ENST00000520752 SETBP1Q9Y6X0 1596 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PLCH2O75038 1416 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 LOC100289279A0A1B0GTE1 492 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 HTR3EA5X5Y0 456 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 CETN3O15182 167 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 RPS6KB1P23443 525 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 MAOBP27338 520 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 CLCN2P51788 898 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 RHBDL3P58872 404 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PPP2R2AP63151 447 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 KRT83P78385 493 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 LRRC14Q15048 493 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 RCN1Q15293 331 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 GRIK4Q16099 956 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 CNGA3Q16281 694 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PDCD4Q53EL6 469 aaKnown RBP9.34□□□□□ -0.91
SHPRH-208ENST00000520752 SPDYCQ5MJ68 293 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 WASHC2DQ5SRD0 308 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 DAB2IPQ5VWQ8 1189 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 TRPM8Q7Z2W7 1104 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 CROCCP2Q86T23 111 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 RELL1Q8IUW5 271 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 PASD1Q8IV76 773 aa9.34□□□□□ -0.91
SHPRH-208ENST00000520752 TMEM130Q8N3G9 435 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms