RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PPP2CAP67775 309 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 MEF2AQ02078 507 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-207ENST00000518569 PLEKHG6Q3KR16 790 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 TOR2AQ5JU69 321 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 GJC2Q5T442 439 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-207ENST00000518569 GAREM2Q75VX8 874 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 GPR155Q7Z3F1 870 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 CLEC14AQ86T13 490 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 SYT8Q8NBV8 401 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 FATE1Q969F0 183 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 CHMP4CQ96CF2 233 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 SLC7A6OSQ96CW6 309 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-207ENST00000518569 FDXACB1Q9BRP7 624 aaPredicted RBP4.97□□□□□ -1.61
VPS13B-207ENST00000518569 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 IFT122Q9HBG6 1241 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 MKS1Q9NXB0 559 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 DPP7Q9UHL4 492 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 DNAI1Q9UI46 699 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 EDARQ9UNE0 448 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 PTPN22Q9Y2R2 807 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 MRFAP1Q9Y605 127 aa4.97□□□□□ -1.61
VPS13B-207ENST00000518569 A0A1W2PR48 441 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 KLHL33A6NCF5 533 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 MTSS1O43312 755 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 ALDH1L1O75891 902 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 LY86O95711 162 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 GAAP10253 952 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 AGXTP21549 392 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 EPHB4P54760 987 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 RRADP55042 308 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 SRSF2Q01130 221 aaKnown RBP4.96□□□□□ -1.62
VPS13B-207ENST00000518569 HGFACQ04756 655 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 ADAM15Q13444 863 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 PTPN21Q16825 1174 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 ABCB5Q2M3G0 1257 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 GAGE13Q4V321 117 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 LMBR1LQ6UX01 489 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 BTNL9Q6UXG8 535 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 ARHGEF18Q6ZSZ5 1173 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 TAS1R1Q7RTX1 841 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 PLA2G15Q8NCC3 412 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 FEZF2Q8TBJ5 459 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 TSPEARQ8WU66 669 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 C20orf173Q96LM9 149 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 KIAA1683Q9H0B3 1180 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 SLC6A15Q9H2J7 730 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 C14orf93Q9H972 538 aaKnown RBP4.96□□□□□ -1.62
VPS13B-207ENST00000518569 INVSQ9Y283 1065 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 NR2E1Q9Y466 385 aa4.96□□□□□ -1.62
VPS13B-207ENST00000518569 C2orf78A6NCI8 922 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 OTOL1A6NHN0 477 aaPredicted RBP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 CNOT4O95628 575 aaKnown RBP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 MT-CO1P00395 513 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 HNRNPLP14866 589 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 ADCY7P51828 1080 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 CD69Q07108 199 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 NFIXQ14938 502 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 PCBP2Q15366 365 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 TBR1Q16650 682 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 RNF151Q2KHN1 245 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 LCE5AQ5TCM9 118 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 MBNL2Q5VZF2 373 aaKnown RBP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 GCDHQ92947 438 aaPredicted RBP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 TEPSINQ96N21 525 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 UIMC1Q96RL1 719 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 SMAD5Q99717 465 aaKnown RBP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 PUF60Q9UHX1 559 aaKnown RBP4.95□□□□□ -1.62
VPS13B-207ENST00000518569 FAM184BQ9ULE4 1060 aa4.95□□□□□ -1.62
VPS13B-207ENST00000518569 A0A0G2JLL6 359 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 E2F8A0AVK6 867 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 LAMTOR5O43504 91 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PCDHGA12O60330 932 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 S100BP04271 92 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 JUNP05412 331 aaKnown RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 LTA4HP09960 611 aaKnown RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 SYN1P17600 705 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 CCND1P24385 295 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 KIR2DL3P43628 341 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 EPHB1P54762 984 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 WNT3AP56704 352 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 RAC3P60763 192 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 CDK17Q00537 523 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 MGAT5Q09328 741 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 TTF1Q15361 905 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 CLUL1Q15846 466 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 ADRM1Q16186 407 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 C19orf54Q5BKX5 351 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 TMEM240Q5SV17 173 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 ODR4Q5SWX8 454 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 SLFN13Q68D06 897 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 FAM180AQ6UWF9 173 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 ZBTB46Q86UZ6 589 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PNMA8AQ86V59 439 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 PIK3C3Q8NEB9 887 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 CFHR4Q92496 578 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 JADE3Q92613 823 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 RABGGTAQ92696 567 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 CAMKK2Q96RR4 588 aa4.94□□□□□ -1.62
VPS13B-207ENST00000518569 ACE2Q9BYF1 805 aaPredicted RBP4.94□□□□□ -1.62
VPS13B-207ENST00000518569 METTL14Q9HCE5 456 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms