RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 MSX1P28360 303 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 HOXA13P31271 388 aaPredicted RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 MTHFRP42898 656 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 IGBP1P78318 339 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 UBE3AQ05086 875 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 DMWDQ09019 674 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 TDGQ13569 410 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 TMEM266Q2M3C6 531 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 FAM102BQ5T8I3 360 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 TMC5Q6UXY8 1006 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 CYFIP1Q7L576 1253 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 ZDHHC14Q8IZN3 488 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 PHTF2Q8N3S3 785 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 RSAD2Q8WXG1 361 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 PDCD2LQ9BRP1 358 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 TBC1D17Q9HA65 648 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 CYP26B1Q9NR63 512 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 TYW1Q9NV66 732 aaKnown RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 GDF2Q9UK05 429 aaPredicted RBP6.55□□□□□ -1.36
LINC00535-202ENST00000517785 DUSP12Q9UNI6 340 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 FRYQ5TBA9 3013 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 RALGAPA1Q6GYQ0 2036 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 COL4A3Q01955 1670 aa6.55□□□□□ -1.36
LINC00535-202ENST00000517785 DOCK8Q8NF50 2099 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 DHX16O60231 1041 aaKnown RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 MGEA5O60502 916 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 CLASP2O75122 1294 aaKnown RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 LRRN2O75325 713 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 STAU1O95793 577 aaKnown RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 HSPD1P10809 573 aaKnown RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 FGFR1P11362 822 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 EPCAMP16422 314 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 ADAM17P78536 824 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 MRPS6P82932 125 aaKnown RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 ITIH3Q06033 890 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PPFIA1Q13136 1202 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PAK2Q13177 524 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PGM5Q15124 567 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 QRICH1Q2TAL8 776 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 KIAA1841Q6NSI8 718 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 TMC7Q7Z402 723 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 RSPH3Q86UC2 560 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 MCF2L2Q86YR7 1114 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PGBD3Q8N328 593 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 KBTBD3Q8NAB2 608 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 RGS22Q8NE09 1264 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 ST13P5Q8NFI4 369 aaPredicted RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 RASGRP4Q8TDF6 673 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 RHBDD1Q8TEB9 315 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 EDARADDQ8WWZ3 215 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 AUTS2Q8WXX7 1259 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 MRPS27Q92552 414 aaKnown RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 GPR20Q99678 358 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 RTKNQ9BST9 563 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 USP26Q9BXU7 913 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 FOXQ1Q9C009 403 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 TMX1Q9H3N1 280 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 KCNK12Q9HB15 430 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 ETNK1Q9HBU6 452 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 VAT1LQ9HCJ6 419 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 TUBE1Q9UJT0 475 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PNMA2Q9UL42 364 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 ZNF215Q9UL58 517 aaPredicted RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 MKL2Q9ULH7 1088 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 ATXN7L1Q9ULK2 861 aaPredicted RBP6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PADI3Q9ULW8 664 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 PCDHB7Q9Y5E2 793 aa6.54□□□□□ -1.36
LINC00535-202ENST00000517785 SMG1Q96Q15 3661 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 C2CD2LO14523 706 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 OPLAHO14841 1288 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 FOXP2O15409 715 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 GLULP15104 373 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 NOVP48745 357 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 SARSP49591 514 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 TBC1D8BQ0IIM8 1120 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 USP4Q13107 963 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 GRIK4Q16099 956 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 LPAL2Q16609 132 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 EFHC2Q5JST6 749 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 ATAT1Q5SQI0 421 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 PDE12Q6L8Q7 609 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 TAF2Q6P1X5 1199 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 XRRA1Q6P2D8 792 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 FCHSD1Q86WN1 690 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 C1orf210Q8IVY1 113 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 SIRT2Q8IXJ6 389 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 ADGRF4Q8IZF3 695 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 MAML2Q8IZL2 1156 aaPredicted RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 PANK1Q8TE04 598 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 ACSF2Q96CM8 615 aaPredicted RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 ZKSCAN3Q9BRR0 538 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 FTHL17Q9BXU8 183 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 CWH43Q9H720 699 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 PARD6AQ9NPB6 346 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 NGRNQ9NPE2 291 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 NDFIP2Q9NV92 336 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 PUF60Q9UHX1 559 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 DOLKQ9UPQ8 538 aa6.53□□□□□ -1.36
LINC00535-202ENST00000517785 SMG5Q9UPR3 1016 aaKnown RBP6.53□□□□□ -1.36
LINC00535-202ENST00000517785 GINS2Q9Y248 185 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms