RNA–Protein interactions for RNA: ENST00000513522.5

CCSER1-211, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 605 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-211ENST00000513522 SAGE1Q9NXZ1 904 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 FAM13BQ9NYF5 915 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 LIMCH1Q9UPQ0 1083 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 DDX49Q9Y6V7 483 aaKnown RBP4.78□□□□□ -1.64
CCSER1-211ENST00000513522 ATAD5Q96QE3 1844 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 LOC285556D6RIA3 1793 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 RLFQ13129 1914 aa4.78□□□□□ -1.64
CCSER1-211ENST00000513522 BRCA2P51587 3418 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 PNMA6FA0A0J9YX94 578 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 PTPDC1A2A3K4 754 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 ZBTB5O15062 677 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 PRPF3O43395 683 aaKnown RBP4.77□□□□□ -1.65
CCSER1-211ENST00000513522 ZBED4O75132 1171 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 ICAM1P05362 532 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CTSBP07858 339 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CALM1P0DP23 149 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CALM2P0DP24 149 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CALM3P0DP25 149 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 INSRRP14616 1297 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 BRD2P25440 801 aaKnown RBP4.77□□□□□ -1.65
CCSER1-211ENST00000513522 SMARCA1P28370 1054 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 GNAQP50148 359 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 LBX1P52954 281 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 LACTBP83111 547 aaPredicted RBP4.77□□□□□ -1.65
CCSER1-211ENST00000513522 SP3Q02447 781 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CUL4AQ13619 759 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 PLS1Q14651 629 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 NPY5RQ15761 445 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 USH1GQ495M9 461 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 WWC2Q6AWC2 1192 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 SNRNP48Q6IEG0 339 aaKnown RBP4.77□□□□□ -1.65
CCSER1-211ENST00000513522 GPR142Q7Z601 462 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 MB21D1Q8N884 522 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 GPRC5AQ8NFJ5 357 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 SMARCC2Q8TAQ2 1214 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CD99L2Q8TCZ2 262 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 ASB11Q8WXH4 323 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 COA7Q96BR5 231 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 FGD4Q96M96 766 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 LZTS2Q9BRK4 669 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 SLC26A6Q9BXS9 759 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 TEX13BQ9BXU2 312 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 SLKQ9H2G2 1235 aaPredicted RBP4.77□□□□□ -1.65
CCSER1-211ENST00000513522 HOMER2Q9NSB8 354 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 RBM28Q9NW13 759 aaKnown RBP4.77□□□□□ -1.65
CCSER1-211ENST00000513522 COL20A1Q9P218 1284 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CNTN3Q9P232 1028 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 EGFL7Q9UHF1 273 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 GJD2Q9UKL4 321 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CCPG1Q9ULG6 757 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 GABRQQ9UN88 632 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 PTPRFP10586 1907 aa4.77□□□□□ -1.65
CCSER1-211ENST00000513522 CENPFP49454 3210 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 ASTN1O14525 1302 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 DNAJC25-GNG10A0A024R161 153 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 CCDC196A0A1B0GTZ2 297 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 STXBP3O00186 592 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 ZBTB39O15060 712 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 EDIL3O43854 480 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 DHX16O60231 1041 aaKnown RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 FKTNO75072 461 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 ALAS1P13196 640 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 SCG2P13521 617 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 PSMC4P43686 418 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 OAZ1P54368 228 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 PRKCZQ05513 592 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 GRB14Q14449 540 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 PPP2R5BQ15173 497 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 PFKFB3Q16875 520 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 HEATR3Q7Z4Q2 680 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 PLEKHH3Q7Z736 793 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 SHCBP1Q8NEM2 672 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 NPLOC4Q8TAT6 608 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 HELQQ8TDG4 1101 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 SYTL5Q8TDW5 730 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 USP6NLQ92738 828 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 RRP36Q96EU6 259 aaKnown RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 DDX11Q96FC9 970 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 ZSCAN31Q96LW9 406 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 XYLT2Q9H1B5 865 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 A1CFQ9NQ94 594 aaKnown RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 RAD18Q9NS91 495 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 RNF146Q9NTX7 359 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 C19orf73Q9NVV2 129 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 BARHL2Q9NY43 387 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 VPS54Q9P1Q0 977 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 ORC3Q9UBD5 711 aaPredicted RBP4.76□□□□□ -1.65
CCSER1-211ENST00000513522 AP4E1Q9UPM8 1137 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 PCDHA1Q9Y5I3 950 aa4.76□□□□□ -1.65
CCSER1-211ENST00000513522 STK36Q9NRP7 1315 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 MEIS2O14770 477 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 CPLX1O14810 134 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 TRIM13O60858 407 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 LEFTY1O75610 366 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 DEXIO95424 95 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 SLC25A27O95847 323 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 PGK2P07205 417 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 SRFP11831 508 aa4.75□□□□□ -1.65
CCSER1-211ENST00000513522 NPR3P17342 541 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms