RNA–Protein interactions for RNA: ENST00000513522.5

CCSER1-211, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 605 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-211ENST00000513522 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
CCSER1-211ENST00000513522 CHIC1Q5VXU3 224 aa20.64■□□□□ 0.89
CCSER1-211ENST00000513522 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
CCSER1-211ENST00000513522 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
CCSER1-211ENST00000513522 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
CCSER1-211ENST00000513522 FOXD1Q16676 465 aa17.81■□□□□ 0.44
CCSER1-211ENST00000513522 MSH5O43196 834 aa16.93■□□□□ 0.3
CCSER1-211ENST00000513522 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
CCSER1-211ENST00000513522 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
CCSER1-211ENST00000513522 ADRA2BP18089 450 aa15.97■□□□□ 0.15
CCSER1-211ENST00000513522 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
CCSER1-211ENST00000513522 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
CCSER1-211ENST00000513522 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
CCSER1-211ENST00000513522 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
CCSER1-211ENST00000513522 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
CCSER1-211ENST00000513522 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
CCSER1-211ENST00000513522 DCAF8L1A6NGE4 600 aa14.34□□□□□ -0.11
CCSER1-211ENST00000513522 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
CCSER1-211ENST00000513522 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
CCSER1-211ENST00000513522 POTEHQ6S545 545 aa13.83□□□□□ -0.2
CCSER1-211ENST00000513522 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
CCSER1-211ENST00000513522 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
CCSER1-211ENST00000513522 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
CCSER1-211ENST00000513522 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
CCSER1-211ENST00000513522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCSER1-211ENST00000513522 DSG3P32926 999 aa13.22□□□□□ -0.29
CCSER1-211ENST00000513522 CAPN15O75808 1086 aa13.1□□□□□ -0.31
CCSER1-211ENST00000513522 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-211ENST00000513522 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
CCSER1-211ENST00000513522 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
CCSER1-211ENST00000513522 NPM3O75607 178 aaKnown RBP12.84□□□□□ -0.35
CCSER1-211ENST00000513522 ABCB7O75027 752 aa12.73□□□□□ -0.37
CCSER1-211ENST00000513522 TRHP20396 242 aaPredicted RBP12.71□□□□□ -0.37
CCSER1-211ENST00000513522 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
CCSER1-211ENST00000513522 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
CCSER1-211ENST00000513522 SP7Q8TDD2 431 aaPredicted RBP12.6□□□□□ -0.39
CCSER1-211ENST00000513522 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
CCSER1-211ENST00000513522 APLP2Q06481 763 aa12.57□□□□□ -0.4
CCSER1-211ENST00000513522 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
CCSER1-211ENST00000513522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
CCSER1-211ENST00000513522 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
CCSER1-211ENST00000513522 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
CCSER1-211ENST00000513522 POLA2Q14181 598 aa12.21□□□□□ -0.45
CCSER1-211ENST00000513522 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
CCSER1-211ENST00000513522 HAX1O00165 279 aa12.18□□□□□ -0.46
CCSER1-211ENST00000513522 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
CCSER1-211ENST00000513522 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
CCSER1-211ENST00000513522 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCSER1-211ENST00000513522 EVX2Q03828 476 aa12.01□□□□□ -0.49
CCSER1-211ENST00000513522 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
CCSER1-211ENST00000513522 KCNA4P22459 653 aa11.91□□□□□ -0.5
CCSER1-211ENST00000513522 MYCNP04198 464 aaPredicted RBP11.86□□□□□ -0.51
CCSER1-211ENST00000513522 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
CCSER1-211ENST00000513522 LHX8Q68G74 356 aa11.83□□□□□ -0.52
CCSER1-211ENST00000513522 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
CCSER1-211ENST00000513522 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
CCSER1-211ENST00000513522 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
CCSER1-211ENST00000513522 GABBR2O75899 941 aa11.68□□□□□ -0.54
CCSER1-211ENST00000513522 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
CCSER1-211ENST00000513522 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
CCSER1-211ENST00000513522 CLEC11AQ9Y240 323 aa11.46□□□□□ -0.57
CCSER1-211ENST00000513522 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
CCSER1-211ENST00000513522 SPDYE6P0CI01 402 aa11.45□□□□□ -0.58
CCSER1-211ENST00000513522 SPDYE2Q495Y8 402 aa11.45□□□□□ -0.58
CCSER1-211ENST00000513522 POTEIP0CG38 1075 aa11.44□□□□□ -0.58
CCSER1-211ENST00000513522 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
CCSER1-211ENST00000513522 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
CCSER1-211ENST00000513522 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
CCSER1-211ENST00000513522 FBLN2P98095 1184 aa11.25□□□□□ -0.61
CCSER1-211ENST00000513522 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
CCSER1-211ENST00000513522 CD44P16070 742 aaKnown RBP11.2□□□□□ -0.62
CCSER1-211ENST00000513522 CLCN6P51797 869 aa11.2□□□□□ -0.62
CCSER1-211ENST00000513522 ZNF692Q9BU19 519 aaPredicted RBP11.2□□□□□ -0.62
CCSER1-211ENST00000513522 PRR29P0C7W0 189 aa11.17□□□□□ -0.62
CCSER1-211ENST00000513522 DCBLD2Q96PD2 775 aa11.17□□□□□ -0.62
CCSER1-211ENST00000513522 POTEMA6NI47 508 aa11.15□□□□□ -0.62
CCSER1-211ENST00000513522 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
CCSER1-211ENST00000513522 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
CCSER1-211ENST00000513522 POTEGQ6S5H5 508 aa11.1□□□□□ -0.63
CCSER1-211ENST00000513522 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
CCSER1-211ENST00000513522 ATXN8OSP0DMR3 200 aa11.08□□□□□ -0.64
CCSER1-211ENST00000513522 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
CCSER1-211ENST00000513522 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
CCSER1-211ENST00000513522 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
CCSER1-211ENST00000513522 PABPN1Q86U42 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCSER1-211ENST00000513522 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
CCSER1-211ENST00000513522 ZBTB22O15209 634 aa10.94□□□□□ -0.66
CCSER1-211ENST00000513522 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
CCSER1-211ENST00000513522 GALR2O43603 387 aaPredicted RBP10.92□□□□□ -0.66
CCSER1-211ENST00000513522 PELP1Q8IZL8 1130 aaKnown RBP10.81□□□□□ -0.68
CCSER1-211ENST00000513522 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
CCSER1-211ENST00000513522 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
CCSER1-211ENST00000513522 FAM163AQ96GL9 167 aaPredicted RBP10.73□□□□□ -0.69
CCSER1-211ENST00000513522 CREBZFQ9NS37 354 aa10.73□□□□□ -0.69
CCSER1-211ENST00000513522 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
CCSER1-211ENST00000513522 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
CCSER1-211ENST00000513522 METRNQ9UJH8 293 aa10.7□□□□□ -0.7
CCSER1-211ENST00000513522 C7P10643 843 aa10.66□□□□□ -0.7
CCSER1-211ENST00000513522 SLC39A7Q92504 469 aa10.65□□□□□ -0.7
CCSER1-211ENST00000513522 PAK3O75914 559 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms