RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 HOXA11P31270 313 aaPredicted RBP14.29□□□□□ -0.12
RNF4-206ENST00000504782 TXKP42681 527 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 BCAR1P56945 870 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 CDC42EP1Q00587 391 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 EMC2Q15006 297 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 CALCRLQ16602 461 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 LLGL2Q6P1M3 1020 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 FERMT3Q86UX7 667 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 CCDC83Q8IWF9 413 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 SLFN12Q8IYM2 578 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 SLC7A3Q8WY07 619 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 PPP2R3CQ969Q6 453 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 MTMR9Q96QG7 549 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 KIF2CQ99661 725 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 NAP1L4Q99733 375 aaKnown RBP14.29□□□□□ -0.12
RNF4-206ENST00000504782 HSD17B14Q9BPX1 270 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 TRAIPQ9BWF2 469 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 ZSWIM4Q9H7M6 989 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 TTC12Q9H892 705 aaPredicted RBP14.29□□□□□ -0.12
RNF4-206ENST00000504782 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 SPG21Q9NZD8 308 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 CDH22Q9UJ99 828 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 FAM50BQ9Y247 325 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 INPP5FQ9Y2H2 1132 aa14.29□□□□□ -0.12
RNF4-206ENST00000504782 USP15Q9Y4E8 981 aaPredicted RBP14.29□□□□□ -0.12
RNF4-206ENST00000504782 POTEMA6NI47 508 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 RFC5P40937 340 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 CSPP1Q1MSJ5 1256 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 AGMOQ6ZNB7 445 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 ZNF280BQ86YH2 543 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 RNF135Q8IUD6 432 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 RNF149Q8NC42 400 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 FEZF2Q8TBJ5 459 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 ASAP3Q8TDY4 903 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 PIGOQ8TEQ8 1089 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 PSPC1Q8WXF1 523 aaKnown RBP14.28□□□□□ -0.12
RNF4-206ENST00000504782 AUTS2Q8WXX7 1259 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
RNF4-206ENST00000504782 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
RNF4-206ENST00000504782 NRDE2Q9H7Z3 1164 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 BRMS1Q9HCU9 246 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 AGPAT5Q9NUQ2 364 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 TBC1D13Q9NVG8 400 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 DNAJB4Q9UDY4 337 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 MUTYHQ9UIF7 546 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 PCDHB2Q9Y5E7 798 aa14.28□□□□□ -0.12
RNF4-206ENST00000504782 NEMFO60524 1076 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 DKC1O60832 514 aaKnown RBP eCLIP14.27□□□□□ -0.13
RNF4-206ENST00000504782 ZNF623O75123 536 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 ZC3H11AO75152 810 aaKnown RBP eCLIP14.27□□□□□ -0.13
RNF4-206ENST00000504782 DDHD2O94830 711 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 MCM7P33993 719 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 SYCE2Q6PIF2 218 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 OTUD6AQ7L8S5 288 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 TMC7Q7Z402 723 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 CPB2Q96IY4 423 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 MTRQ99707 1265 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 VN1R3Q9BXE9 311 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 S1PR5Q9H228 398 aa14.27□□□□□ -0.13
RNF4-206ENST00000504782 PUF60Q9UHX1 559 aaKnown RBP14.27□□□□□ -0.13
RNF4-206ENST00000504782 TDRD15B5MCY1 1934 aaKnown RBP14.26□□□□□ -0.13
RNF4-206ENST00000504782 C2orf71A6NGG8 1288 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 DCXO43602 365 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 GALTP07902 379 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 SPATA31C1P0DKV0 1188 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 PPM1AP35813 382 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 TECP42680 631 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 SLC11A1P49279 550 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 KRT17Q04695 432 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 TRIM29Q14134 588 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 C8orf34Q49A92 452 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 PDE12Q6L8Q7 609 aaKnown RBP14.26□□□□□ -0.13
RNF4-206ENST00000504782 ANKRD54Q6NXT1 300 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 KANK3Q6NY19 840 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 TMEM184AQ6ZMB5 413 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 SRGAP1Q7Z6B7 1085 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 MRPL43Q8N983 215 aaKnown RBP14.26□□□□□ -0.13
RNF4-206ENST00000504782 SMG8Q8ND04 991 aaKnown RBP14.26□□□□□ -0.13
RNF4-206ENST00000504782 EIF2AQ9BY44 585 aaKnown RBP14.26□□□□□ -0.13
RNF4-206ENST00000504782 MRPL9Q9BYD2 267 aaKnown RBP14.26□□□□□ -0.13
RNF4-206ENST00000504782 RNF39Q9H2S5 420 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 LIMCH1Q9UPQ0 1083 aa14.26□□□□□ -0.13
RNF4-206ENST00000504782 LOC730098B7Z3J9 87 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 TSPAN1O60635 241 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 CLASP2O75122 1294 aaKnown RBP14.25□□□□□ -0.13
RNF4-206ENST00000504782 MED24O75448 989 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 LYPLA2O95372 231 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 ALADP13716 330 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 ARL2P36404 184 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 ALDH7A1P49419 539 aaKnown RBP14.25□□□□□ -0.13
RNF4-206ENST00000504782 RARRES1P49788 294 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 PTENP60484 403 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 CAPSQ13938 189 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 NBR1Q14596 966 aa14.25□□□□□ -0.13
RNF4-206ENST00000504782 ZNF174Q15697 407 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms