RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PATL2C9JE40 543 aaKnown RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 PROB1E7EW31 1015 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 H3BRB1 525 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 MGEA5O60502 916 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 PPP1R11O60927 126 aaPredicted RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 RAB11FIP3O75154 756 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 DGKIO75912 1065 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 MYBP10242 640 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 FGFR1P11362 822 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 ERVFC1P60507 584 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 HNRNPUQ00839 825 aaKnown RBP eCLIP4.21□□□□□ -1.74
USP46-205ENST00000504078 MGAT3Q09327 533 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 COASYQ13057 564 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 PPFIA1Q13136 1202 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 SEMA3FQ13275 785 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 MTMR3Q13615 1198 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 PGM5Q15124 567 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 PWP2Q15269 919 aaKnown RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 ANGPT1Q15389 498 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 DUSP6Q16828 381 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 SPECC1Q5M775 1068 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 SAMD5Q5TGI4 173 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 SYCE2Q6PIF2 218 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 CYFIP1Q7L576 1253 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 SYT9Q86SS6 491 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 ZNF589Q86UQ0 364 aaPredicted RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 THNSL1Q8IYQ7 743 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 ADGRF4Q8IZF3 695 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 TDRD5Q8NAT2 981 aaKnown RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 DNAJB3Q8WWF6 145 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 AUTS2Q8WXX7 1259 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 SUSD6Q92537 303 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 APBB2Q92870 758 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 CLP1Q92989 425 aaKnown RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 PPP2R3CQ969Q6 453 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 ZNF689Q96CS4 500 aaPredicted RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 GPATCH3Q96I76 525 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 FAM227BQ96M60 508 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 NEK1Q96PY6 1258 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 PDCD2LQ9BRP1 358 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 TUT1Q9H6E5 874 aaKnown RBP4.21□□□□□ -1.74
USP46-205ENST00000504078 ZDHHC3Q9NYG2 299 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 RTEL1Q9NZ71 1219 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 GINS2Q9Y248 185 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 ZDBF2Q9HCK1 2354 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 LOXHD1Q8IVV2 1947 aa4.21□□□□□ -1.74
USP46-205ENST00000504078 FNDC1Q4ZHG4 1894 aaPredicted RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 B4DLN1 442 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 B4E1Z4 1266 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 EFSO43281 561 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 NCK2O43639 380 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 NARSO43776 548 aaKnown RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 ORC4O43929 436 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 FGF18O76093 207 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 RB1P06400 928 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 ZFYP08048 801 aaPredicted RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 HOXD8P13378 290 aaPredicted RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 SCG2P13521 617 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 RFX1P22670 979 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 CCND2P30279 289 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 HOXC8P31273 242 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 MRPL12P52815 198 aaKnown RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 MRPS6P82932 125 aaKnown RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 PAK2Q13177 524 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 PKN1Q16512 942 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 OXLD1Q5BKU9 147 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 FBXO47Q5MNV8 452 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 MCTP2Q6DN12 878 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 ANKRD54Q6NXT1 300 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 TSHZ1Q6ZSZ6 1077 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 NPAS4Q8IUM7 802 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 CMTR2Q8IYT2 770 aaKnown RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 SIX5Q8N196 739 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 STAG2Q8N3U4 1231 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 COLGALT1Q8NBJ5 622 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 RNF169Q8NCN4 708 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 CYP2W1Q8TAV3 490 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 PI4K2BQ8TCG2 481 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 TNFRSF25Q93038 417 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 ZNF668Q96K58 619 aaPredicted RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 GPR20Q99678 358 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 TCF25Q9BQ70 676 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 ERVK-5Q9HDB9 667 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 ZBTB40Q9NUA8 1239 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 TMEM260Q9NX78 707 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 TUBE1Q9UJT0 475 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 FBXL21Q9UKT6 434 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 ZNF215Q9UL58 517 aaPredicted RBP4.2□□□□□ -1.74
USP46-205ENST00000504078 LRFN2Q9ULH4 789 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 CA14Q9ULX7 337 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 SORCS3Q9UPU3 1222 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 STARD13Q9Y3M8 1113 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 RWDD3Q9Y3V2 267 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 DNAH14Q0VDD8 3507 aa4.2□□□□□ -1.74
USP46-205ENST00000504078 A0A0A0MRY4 1105 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 ENPP3O14638 875 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 LRRN2O75325 713 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 EIF3JO75822 258 aaKnown RBP4.19□□□□□ -1.74
USP46-205ENST00000504078 ALBP02768 609 aa4.19□□□□□ -1.74
USP46-205ENST00000504078 DCNP07585 359 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms