RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 IFT88Q13099 833 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 PDAP1Q13442 181 aaKnown RBP12.6□□□□□ -0.39
USP46-204ENST00000503060 XKR9Q5GH70 373 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 SH2D3AQ9BRG2 576 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 TMEM206Q9H813 350 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 ZNF446Q9NWS9 450 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 GCNT4Q9P109 453 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 SAR1BQ9Y6B6 198 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 CTAGE15A4D2H0 777 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 RGS20O76081 388 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 CTAGE8P0CG41 777 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 KCNA2P16389 499 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 ARID5AQ03989 594 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 VGLL4Q14135 290 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 PPP2R5AQ15172 486 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 DLK2Q6UY11 383 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 CTAGE6Q86UF2 777 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 CTAGE4Q8IX94 777 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP46-204ENST00000503060 ACCSQ96QU6 501 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 ADARB2Q9NS39 739 aaKnown RBP12.6□□□□□ -0.39
USP46-204ENST00000503060 PCDHA10Q9Y5I2 948 aa12.6□□□□□ -0.39
USP46-204ENST00000503060 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
USP46-204ENST00000503060 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 EXOC3O60645 756 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 MOCS3O95396 460 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 FMO5P49326 533 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 NPEPPSP55786 919 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 IRF2BP2Q7Z5L9 587 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 CAPN6Q9Y6Q1 641 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 SBF1O95248 1867 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 NFASCO94856 1347 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 STAM2O75886 525 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 EGFLAMQ63HQ2 1017 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 CDHR1Q96JP9 859 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 LUC7LQ9NQ29 371 aaKnown RBP12.59□□□□□ -0.39
USP46-204ENST00000503060 GPRC5CQ9NQ84 441 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 OGFRQ9NZT2 677 aa12.59□□□□□ -0.39
USP46-204ENST00000503060 AJAP1Q9UKB5 411 aaPredicted RBP12.59□□□□□ -0.39
USP46-204ENST00000503060 ADM5C9JUS6 153 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 ABCD1P33897 745 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 JAM2P57087 298 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 GTF2BQ00403 316 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
USP46-204ENST00000503060 TMCO3Q6UWJ1 677 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 ANO5Q75V66 913 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 TRMT1LQ7Z2T5 733 aaKnown RBP12.58□□□□□ -0.4
USP46-204ENST00000503060 HAUS6Q7Z4H7 955 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 PCGF5Q86SE9 256 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 C12orf56Q8IXR9 622 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 TMEM174Q8WUU8 243 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
USP46-204ENST00000503060 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 JRKLQ9Y4A0 524 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 BZW2Q9Y6E2 419 aaKnown RBP12.58□□□□□ -0.4
USP46-204ENST00000503060 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 A0A087X0T9 212 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
USP46-204ENST00000503060 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 FAM228BP0C875 321 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 TRIM49P0CI25 452 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 TRIM49CP0CI26 452 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 NAT2P11245 290 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 PRKCIP41743 596 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 NCKAP1LP55160 1127 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 PEX3P56589 373 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 TREML2Q5T2D2 321 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 IQCEQ6IPM2 695 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 RNF10Q8N5U6 811 aaKnown RBP12.58□□□□□ -0.4
USP46-204ENST00000503060 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 CHST13Q8NET6 341 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 DCPSQ96C86 337 aaKnown RBP12.58□□□□□ -0.4
USP46-204ENST00000503060 ALS2CR12Q96Q35 445 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 SALL4Q9UJQ4 1053 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 CSADQ9Y600 493 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
USP46-204ENST00000503060 SPATA31C2B4DYI2 1134 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 SLC16A4O15374 487 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 ZNF862O60290 1169 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 DKC1O60832 514 aaKnown RBP eCLIP12.57□□□□□ -0.4
USP46-204ENST00000503060 STBD1O95210 358 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 PSAPP07602 524 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 TGFB3P10600 412 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 PTK2Q05397 1052 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 BFSP1Q12934 665 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 GNPTABQ3T906 1256 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 OTUD6AQ7L8S5 288 aa12.57□□□□□ -0.4
USP46-204ENST00000503060 ZNF571Q7Z3V5 609 aaPredicted RBP12.57□□□□□ -0.4
USP46-204ENST00000503060 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms