RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 COL11A1P12107 1806 aaPredicted RBP6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 FRMPD3Q5JV73 1810 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 ZNF236Q9UL36 1845 aa6.87□□□□□ -1.31
TMEM39A-212ENST00000497993 TNKSO95271 1327 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 ADGRA2Q96PE1 1338 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 A0A1W2PQU0 124 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 TCP10L2B9ZVM9 353 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 TIMM44O43615 452 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 ASLP04424 464 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 DRD2P14416 443 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 ATP5JP18859 108 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 CCND1P24385 295 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 BTDP43251 543 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 RGS3P49796 1198 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 LBX1P52954 281 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 POU5F1Q01860 360 aaKnown RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 PPATQ06203 517 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 PPIL2Q13356 520 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 GBX1Q14549 363 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 RSPO4Q2I0M5 234 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 GNPTABQ3T906 1256 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 TRIM61Q5EBN2 209 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 TTC39AQ5SRH9 613 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 PRR23CQ6ZRP0 262 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 AACSQ86V21 672 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 FAM20CQ8IXL6 584 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 C2CD4AQ8NCU7 369 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 GPBAR1Q8TDU6 330 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 GAL3ST3Q96A11 431 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 WDR89Q96FK6 387 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 CLMNQ96JQ2 1002 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 ZNF341Q9BYN7 854 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 TRIM8Q9BZR9 551 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 OSBPL5Q9H0X9 879 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 DHX36Q9H2U1 1008 aaKnown RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 GSX1Q9H4S2 264 aaPredicted RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 ABCF2Q9UG63 623 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 HERC5Q9UII4 1024 aaKnown RBP6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 ANKRD6Q9Y2G4 727 aa6.86□□□□□ -1.31
TMEM39A-212ENST00000497993 TCRBV5S4A2TA0A5A2 114 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 OPA1O60313 960 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 EFCAB14O75071 495 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 HTR3BO95264 441 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PYGMP11217 842 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 BMP3P12645 472 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 CYP2C19P33261 490 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 USP11P51784 963 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 CACNB3P54284 484 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 ID3Q02535 119 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 KRT72Q14CN4 511 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PCBP1Q15365 356 aaKnown RBP eCLIP6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 ZYXQ15942 572 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PTPN21Q16825 1174 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 RASIP1Q5U651 963 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 NAA16Q6N069 864 aaPredicted RBP6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 TOGARAM2Q6ZUX3 1019 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 ADGRA1Q86SQ6 560 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 CLEC10AQ8IUN9 316 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 GJA10Q969M2 543 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 HAUS7Q99871 368 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 RIOK1Q9BRS2 568 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 SELENOOQ9BVL4 669 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 YIPF2Q9BWQ6 316 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 LRRCC1Q9C099 1032 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PLCB1Q9NQ66 1216 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PIH1D3Q9NQM4 214 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 MAN1C1Q9NR34 630 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 USP40Q9NVE5 1235 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PCDHB10Q9UN67 800 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 SLC45A1Q9Y2W3 748 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 PCDHGC5Q9Y5F6 944 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 CENPFP49454 3210 aa6.85□□□□□ -1.31
TMEM39A-212ENST00000497993 FLT1P17948 1338 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 TTC41PQ6P2S7 1318 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 PLXNA1Q9UIW2 1896 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 DDTLA6NHG4 134 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 CXCL11O14625 94 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 TMPRSS2O15393 492 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 KPNA6O60684 536 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 CTNND1O60716 968 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 BAG3O95817 575 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 FURINP09958 794 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 FGFR1P11362 822 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 NME1P15531 152 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 MCCP23508 829 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 COPB2P35606 906 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 HALP42357 657 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 GTF2A2P52657 109 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 MAP3K12Q12852 859 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 MOGSQ13724 837 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 GTF2H3Q13889 308 aa6.84□□□□□ -1.31
TMEM39A-212ENST00000497993 UBE3CQ15386 1083 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms