RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 KIF2AO00139 706 aaPredicted RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 IGF2BP3O00425 579 aaKnown RBP eCLIP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CASQ2O14958 399 aaPredicted RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ERC2O15083 957 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 P4HA2O15460 535 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PRPF3O43395 683 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 KLHL41O60662 606 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SKAP2O75563 359 aaPredicted RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PAHP00439 452 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SFTPCP11686 197 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 GZMAP12544 262 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 KRT13P13646 458 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 TMOD1P28289 359 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CLCN7P51798 805 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 MOGSQ13724 837 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 LAMB3Q13751 1172 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 INAQ16352 499 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PKN2Q16513 984 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CLEC16AQ2KHT3 1053 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PROSER3Q2NL68 480 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 Q4G0T1 1027 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 DSTYKQ6XUX3 929 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SYT10Q6XYQ8 523 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PRR23BQ6ZRT6 265 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ARHGEF18Q6ZSZ5 1173 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 RSRC2Q7L4I2 434 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 TSPYL5Q86VY4 417 aaPredicted RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 IQCA1Q86XH1 822 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 DDX42Q86XP3 938 aaKnown RBP eCLIP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 HOMER1Q86YM7 354 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 REXO1Q8N1G1 1221 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 USHBP1Q8N6Y0 703 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 UBR7Q8N806 425 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 NKAIN3Q8N8D7 197 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 HNRNPLLQ8WVV9 542 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 KLHL6Q8WZ60 621 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 TIFAQ96CG3 184 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CLIP3Q96DZ5 547 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 MRPL46Q9H2W6 279 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SEMA4AQ9H3S1 761 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 BCAS3Q9H6U6 928 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 GPRC5CQ9NQ84 441 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 DDX21Q9NR30 783 aaKnown RBP eCLIP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 TMEM59LQ9UK28 342 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 VAV3Q9UKW4 847 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 MTUS1Q9ULD2 1270 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 GPR55Q9Y2T6 319 aaPredicted RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PCDHGB3Q9Y5G1 929 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 TMEM94Q12767 1356 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ERCC6Q03468 1493 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 GOLGA8AA7E2F4 631 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PDLIM1O00151 329 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SMAD7O15105 426 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 AKAP10O43572 662 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 VIMP08670 466 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PCP11498 1178 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 GRK2P25098 689 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ETV3P41162 512 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SOX9P48436 509 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 MRPS35P82673 323 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PABPC4Q13310 644 aaKnown RBP eCLIP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PICALMQ13492 652 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 MORC3Q14149 939 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 COG2Q14746 738 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 KIF22Q14807 665 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CPSF6Q16630 551 aaKnown RBP eCLIP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ANKS3Q6ZW76 656 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 MILR1Q7Z6M3 343 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ADAT2Q7Z6V5 191 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 IFNL2Q8IZJ0 200 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 SPATA18Q8TC71 538 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 RNF141Q8WVD5 230 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CCDC114Q96M63 670 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ZMAT2Q96NC0 199 aaKnown RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 DNAJC7Q99615 494 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ALG1Q9BT22 464 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CCDC113Q9H0I3 377 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 TTC12Q9H892 705 aaPredicted RBP3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 CYP4F11Q9HBI6 524 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 GPATCH2Q9NW75 528 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ZNF446Q9NWS9 450 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 IL20Q9NYY1 176 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 AIPL1Q9NZN9 384 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 IPPQ9Y573 584 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 PEG3Q9GZU2 1588 aa3.43□□□□□ -1.86
SNRNP48-202ENST00000496946 ENO4A6NNW6 628 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 MEIS3P2A8K0S8 358 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TTI1O43156 1089 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NMT2O60551 498 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 KATNA1O75449 491 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 CSPG5O95196 566 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 F2P00734 622 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SYPP08247 313 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 ATP5DP30049 168 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GCKP35557 465 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 CEBPAP49715 358 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 RENBPP51606 427 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GABREP78334 506 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 ROR1Q01973 937 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms