RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 SSRP1Q08945 709 aaKnown RBP7.56□□□□□ -1.2
TRA2B-216ENST00000493864 ZNF543Q08ER8 600 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 PPP2R5BQ15173 497 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 CCDC96Q2M329 555 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 CYP4F22Q6NT55 531 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 CPLX2Q6PUV4 134 aaKnown RBP7.56□□□□□ -1.2
TRA2B-216ENST00000493864 ERO1BQ86YB8 467 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 PHACTR4Q8IZ21 702 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 DCAF4Q8WV16 495 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 TMEM40Q8WWA1 233 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 PIBF1Q8WXW3 757 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 FEZ1Q99689 392 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 KIAA1683Q9H0B3 1180 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 VCPKMTQ9H867 229 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 VAT1LQ9HCJ6 419 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
TRA2B-216ENST00000493864 ORC3Q9UBD5 711 aaPredicted RBP7.56□□□□□ -1.2
TRA2B-216ENST00000493864 ISY1Q9ULR0 285 aaKnown RBP7.56□□□□□ -1.2
TRA2B-216ENST00000493864 SYNPO2Q9UMS6 1093 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 ATAD5Q96QE3 1844 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 NID2Q14112 1375 aa7.56□□□□□ -1.2
TRA2B-216ENST00000493864 TMEM232C9JQI7 657 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 CYTH3O43739 400 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SLITRK5O94991 958 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SSBP05455 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRA2B-216ENST00000493864 RAG1P15918 1043 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 DDIT3P35638 169 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SLC16A2P36021 539 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SLC1A4P43007 532 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 HMGCS2P54868 508 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 BACE1P56817 501 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 FKBP1BP68106 108 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 ASPRV1Q53RT3 343 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 PRSS36Q5K4E3 855 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 FAM83BQ5T0W9 1011 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 LETMD1Q6P1Q0 360 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 OGFOD3Q6PK18 319 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 ZNF765Q7L2R6 523 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 JMYQ8N9B5 988 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 ATG4CQ96DT6 458 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 AIFM3Q96NN9 605 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 LZTS2Q9BRK4 669 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SLC26A6Q9BXS9 759 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 OSBPL1AQ9BXW6 950 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 SH2D4AQ9H788 454 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 AS3MTQ9HBK9 375 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 CWC22Q9HCG8 908 aaKnown RBP7.55□□□□□ -1.2
TRA2B-216ENST00000493864 PAPPA2Q9BXP8 1791 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 DOCK1Q14185 1865 aa7.55□□□□□ -1.2
TRA2B-216ENST00000493864 RASSF10A6NK89 507 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 C19orf81C9J6K1 198 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 CXCL11O14625 94 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 PRPF3O43395 683 aaKnown RBP7.54□□□□□ -1.2
TRA2B-216ENST00000493864 CDKL5O76039 1030 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 SMARCA1P28370 1054 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 SNAP25P60880 206 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 HMGN5P82970 282 aaKnown RBP7.54□□□□□ -1.2
TRA2B-216ENST00000493864 PPATQ06203 517 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 PPIL2Q13356 520 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 PKN1Q16512 942 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 DEFB115Q30KQ5 88 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 GPATCH4Q5T3I0 446 aaKnown RBP7.54□□□□□ -1.2
TRA2B-216ENST00000493864 LARP1BQ659C4 914 aaKnown RBP7.54□□□□□ -1.2
TRA2B-216ENST00000493864 OTUD7BQ6GQQ9 843 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 NLRC3Q7RTR2 1065 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 SAPCD2Q86UD0 394 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 MCF2L2Q86YR7 1114 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 ADGRF4Q8IZF3 695 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 OPTNQ96CV9 577 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 ANAPC16Q96DE5 110 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 PIGSQ96S52 555 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 SPZ1Q9BXG8 430 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 RIOX1Q9H6W3 641 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 JMJD4Q9H9V9 463 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 GJB4Q9NTQ9 266 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 FBXO28Q9NVF7 368 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 STRIP2Q9ULQ0 834 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 MRVI1Q9Y6F6 885 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 PHIPQ8WWQ0 1821 aa7.54□□□□□ -1.2
TRA2B-216ENST00000493864 MEIS3P2A8K0S8 358 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 HSPA1AP0DMV8 641 aaKnown RBP7.53□□□□□ -1.2
TRA2B-216ENST00000493864 HSPA1BP0DMV9 641 aaKnown RBP7.53□□□□□ -1.2
TRA2B-216ENST00000493864 VCAM1P19320 739 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 SYT1P21579 422 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 USP14P54578 494 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 HUNKP57058 714 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 AKAP17AQ02040 695 aaKnown RBP7.53□□□□□ -1.2
TRA2B-216ENST00000493864 GUCY1B3Q02153 619 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 CYP27A1Q02318 531 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 IKQ13123 557 aaPredicted RBP7.53□□□□□ -1.2
TRA2B-216ENST00000493864 PKP1Q13835 747 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 CYP27C1Q4G0S4 372 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 SYDE2Q5VT97 1194 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 CDCP2Q5VXM1 449 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 BTNL9Q6UXG8 535 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
TRA2B-216ENST00000493864 GADL1Q6ZQY3 521 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms