RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 FBXO4Q9UKT5 387 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 PCDHGA2Q9Y5H1 932 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
SSBP1-212ENST00000489378 SPEGQ15772 3267 aa10.51□□□□□ -0.73
SSBP1-212ENST00000489378 IGF2RP11717 2491 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 PNMA6FA0A0J9YX94 578 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ZNF213O14771 459 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 SLC30A4O14863 429 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 LILRB5O75023 590 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 MX1P20591 662 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ALDH7A1P49419 539 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 DMWDQ09019 674 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 TRAF1Q13077 416 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 NMIQ13287 307 aaPredicted RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ECHDC2Q86YB7 292 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ZBTB44Q8NCP5 570 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 SMARCC2Q8TAQ2 1214 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 HELQQ8TDG4 1101 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 PIBF1Q8WXW3 757 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 EVI5LQ96CN4 794 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 VN1R3Q9BXE9 311 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 CHMP4BQ9H444 224 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 MEIS2O14770 477 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 LAMTOR5O43504 91 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ACTN4O43707 911 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 STAT5BP51692 787 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 CLCN4P51793 760 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 CRYBB1P53674 252 aaPredicted RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 POLGP54098 1239 aaPredicted RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 STARD6P59095 220 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 MTMR1Q13613 665 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 IFIT1BQ5T764 474 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 C15orf39Q6ZRI6 1047 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 PLPPR4Q7Z2D5 763 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 DDX53Q86TM3 631 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 PPFIBP1Q86W92 1011 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 TNPO1Q92973 898 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 CDHR1Q96JP9 859 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 KLHL5Q96PQ7 755 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 WDR6Q9NNW5 1121 aaKnown RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 SLC2A4RGQ9NR83 387 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 ANGPTL2Q9UKU9 493 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 MTF2Q9Y483 593 aaPredicted RBP10.5□□□□□ -0.73
SSBP1-212ENST00000489378 UBIAD1Q9Y5Z9 338 aa10.5□□□□□ -0.73
SSBP1-212ENST00000489378 CLUHO75153 1309 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 SALL3Q9BXA9 1300 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.49□□□□□ -0.73
SSBP1-212ENST00000489378 RNF223E7ERA6 249 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 GPR32O75388 356 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 VTNP04004 478 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 CNPP09543 421 aaKnown RBP10.49□□□□□ -0.73
SSBP1-212ENST00000489378 KLRC2P26717 231 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 GGCXP38435 758 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 ACTR2P61160 394 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 SPEM2Q0P670 501 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 GIT2Q14161 759 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 GRM4Q14833 912 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 SEC23AQ15436 765 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 TSSK4Q6SA08 328 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 ZNF598Q86UK7 904 aaKnown RBP10.49□□□□□ -0.73
SSBP1-212ENST00000489378 NETO1Q8TDF5 533 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 NELL1Q92832 810 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 NXPE3Q969Y0 559 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 BORCS6Q96GS4 357 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 IGSF21Q96ID5 467 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 UBAC1Q9BSL1 405 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 BCO2Q9BYV7 579 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 SLC9A2Q9UBY0 812 aa10.49□□□□□ -0.73
SSBP1-212ENST00000489378 ZBTB42B2RXF5 422 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 ANHXE9PGG2 379 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 PIK3CDO00329 1044 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 ZC3H11AO75152 810 aaKnown RBP eCLIP10.48□□□□□ -0.73
SSBP1-212ENST00000489378 SSBP05455 408 aaKnown RBP eCLIP10.48□□□□□ -0.73
SSBP1-212ENST00000489378 MYBP10242 640 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 NT5C2P49902 561 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 HTR4Q13639 388 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 LPAL2Q16609 132 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 C20orf194Q5TEA3 1177 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 CMASQ8NFW8 434 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-212ENST00000489378 STAMQ92783 540 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 CUL5Q93034 780 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 RPP25Q9BUL9 199 aaKnown RBP10.48□□□□□ -0.73
SSBP1-212ENST00000489378 JADE2Q9NQC1 790 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 GMEB2Q9UKD1 530 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 NUMBLQ9Y6R0 609 aa10.48□□□□□ -0.73
SSBP1-212ENST00000489378 DOCK6Q96HP0 2047 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 MYH15Q9Y2K3 1946 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 CCDC195A0A1B0GUA6 201 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 KANSL1LA0AUZ9 987 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 TBC1D4O60343 1298 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 LAMP2P13473 410 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 PMLP29590 882 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 GPC5P78333 572 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 SNW1Q13573 536 aaKnown RBP10.47□□□□□ -0.73
SSBP1-212ENST00000489378 SHDQ96IW2 340 aa10.47□□□□□ -0.73
SSBP1-212ENST00000489378 DDX23Q9BUQ8 820 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms