RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PPFIBP1Q86W92 1011 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 SIAH1Q8IUQ4 282 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 RASGRP4Q8TDF6 673 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 ERCC4Q92889 916 aaPredicted RBP7.38□□□□□ -1.23
PDCD4-209ENST00000489049 NXPE3Q969Y0 559 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 COA7Q96BR5 231 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 NAP1L5Q96NT1 182 aaPredicted RBP7.38□□□□□ -1.23
PDCD4-209ENST00000489049 TMX1Q9H3N1 280 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 MAGEC2Q9UBF1 373 aaPredicted RBP7.38□□□□□ -1.23
PDCD4-209ENST00000489049 ZBTB21Q9ULJ3 1066 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 PCDHA12Q9UN75 941 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
PDCD4-209ENST00000489049 SCN9AQ15858 1988 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 ZNF646O15015 1829 aaPredicted RBP7.38□□□□□ -1.23
PDCD4-209ENST00000489049 EP400Q96L91 3159 aa7.38□□□□□ -1.23
PDCD4-209ENST00000489049 A0A1W2PQC6 194 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 TMEM232C9JQI7 657 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 GAS2O43903 313 aaKnown RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 RAD17O75943 681 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 NPR3P17342 541 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 TAL1P17542 331 aaPredicted RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 PLCG1P19174 1290 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 GTF2F1P35269 517 aaKnown RBP eCLIP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 CAP2P40123 477 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 TXKP42681 527 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 SERPINB4P48594 390 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 USP14P54578 494 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 EIF6P56537 245 aaKnown RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 LRRC63Q05C16 580 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 CXCL9Q07325 125 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 IKQ13123 557 aaPredicted RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 KARSQ15046 597 aaKnown RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 SYCP1Q15431 976 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 CCDC144BQ3MJ40 725 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 TMEM119Q4V9L6 283 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 NAALADL2Q58DX5 795 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 DCAF15Q66K64 600 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 TTBK2Q6IQ55 1244 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 UNC13DQ70J99 1090 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 KRT26Q7Z3Y9 468 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 MCF2L2Q86YR7 1114 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 CNGA4Q8IV77 575 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 MYRIPQ8NFW9 859 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 NELFBQ8WX92 580 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 CRYGNQ8WXF5 182 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 BSNDQ8WZ55 320 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 LARP4BQ92615 738 aaKnown RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 RAD54LQ92698 747 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 MAP7D2Q96T17 732 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 OSMRQ99650 979 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 NUP58Q9BVL2 599 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 ANO3Q9BYT9 981 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 TRIM9Q9C026 710 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 VCPKMTQ9H867 229 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 KCNMB3Q9NPA1 279 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 ZNF277Q9NRM2 450 aaPredicted RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 ADD3Q9UEY8 706 aaKnown RBP7.37□□□□□ -1.23
PDCD4-209ENST00000489049 NRBP1Q9UHY1 535 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 POLIQ9UNA4 740 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 PPP2R3BQ9Y5P8 575 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 MYH4Q9Y623 1939 aa7.37□□□□□ -1.23
PDCD4-209ENST00000489049 CNTNAP1P78357 1384 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 WDR64B1ANS9 1081 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 AKR1B15C9JRZ8 316 aaPredicted RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 GCOM1H8Y6P7 765 aaPredicted RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 SOX1O00570 391 aaPredicted RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 EREGO14944 169 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 WDR46O15213 610 aaKnown RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 KLRC4O43908 158 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 CTNND1O60716 968 aaKnown RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 PPP1R11O60927 126 aaPredicted RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 FAM13AO94988 1023 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 GNA14O95837 355 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 POLR2MP0CAP2 368 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 ATP1A3P13637 1013 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 CCNE1P24864 410 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 TECP42680 631 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 DNM2P50570 870 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 CACNB3P54284 484 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 TUBB4BP68371 445 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 ASIC1P78348 528 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 CCZ1BP86790 482 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 CCZ1P86791 482 aaPredicted RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 ARHGAP4P98171 946 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 SETQ01105 290 aaPredicted RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 GHRHRQ02643 423 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 FMR1Q06787 632 aaKnown RBP eCLIP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 TUBB2AQ13885 445 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 IKBKEQ14164 716 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 PTPN14Q15678 1187 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 SGO2Q562F6 1265 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 ISM2Q6H9L7 571 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 ALKBH2Q6NS38 261 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 XRRA1Q6P2D8 792 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 NIPA1Q7RTP0 329 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 VN1R5Q7Z5H4 357 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 APOBEC3FQ8IUX4 373 aaKnown RBP7.36□□□□□ -1.23
PDCD4-209ENST00000489049 CCDC65Q8IXS2 484 aa7.36□□□□□ -1.23
PDCD4-209ENST00000489049 GRAMD1CQ8IYS0 662 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms