RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TRIM28Q13263 835 aaKnown RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 UBE3CQ15386 1083 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 TAF1BQ53T94 588 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 RIBC1Q8N443 379 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 DDX27Q96GQ7 796 aaKnown RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 AGBL1Q96MI9 1066 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 PHF24Q9UPV7 400 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 TDRKHQ9Y2W6 561 aaKnown RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 TCRBV5S4A2TA0A5A2 114 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 MAGEA13PA6NCF6 341 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 RIPK2O43353 540 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 OPHN1O60890 802 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 GJB6O95452 261 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 CPA2P48052 419 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 PPP2R5CQ13362 524 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 KYNUQ16719 465 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 LRRC57Q8N9N7 239 aa17.38■□□□□ 0.37
MCF2L-229ENST00000488765 DMAP1Q9NPF5 467 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-229ENST00000488765 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
MCF2L-229ENST00000488765 PIAS1O75925 651 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 T-ENOLP0DO92 83 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 CHRNDQ07001 517 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 OVGP1Q12889 678 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 DCAF12L1Q5VU92 463 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 IRGCQ6NXR0 463 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 BLIDQ8IZY5 108 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 SLC7A6OSQ96CW6 309 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-229ENST00000488765 IFT43Q96FT9 208 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.37■□□□□ 0.37
MCF2L-229ENST00000488765 TXLNGQ9NUQ3 528 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 ATXN10Q9UBB4 475 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 NAGPAQ9UK23 515 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 SLC4A7Q9Y6M7 1214 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 PFASO15067 1338 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 VHLP40337 213 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 CENPPQ6IPU0 288 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 TMTC2Q8N394 836 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 KCNQ5Q9NR82 932 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 LRCH1Q9Y2L9 728 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 USP54Q70EL1 1684 aa17.37■□□□□ 0.37
MCF2L-229ENST00000488765 TCRBV7S2A1N4TA0A589 114 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CCNB1P14635 433 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CYP7A1P22680 504 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 Q4G0T1 1027 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 PABPC1LQ4VXU2 614 aaKnown RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 DUPD1Q68J44 220 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CNNM4Q6P4Q7 775 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 RBM12BQ8IXT5 1001 aaKnown RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 WDR60Q8WVS4 1066 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 ALG13Q9NP73 1137 aaKnown RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CEP72Q9P209 647 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CCDC188H7C350 402 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 MARCKSL1P49006 195 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 TROAPQ12815 778 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 MTA1Q13330 715 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 SEC23AQ15436 765 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 ACSBG2Q5FVE4 666 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CCDC97Q96F63 343 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 TTC1Q99614 292 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 TXLNGYQ9BZA5 131 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 STOML1Q9UBI4 398 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CFAP69A5D8W1 941 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 KIAA0391O15091 583 aaKnown RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 MTMR2Q13614 643 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 ZNF365Q70YC5 407 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 MTDHQ86UE4 582 aaKnown RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 CCDC105Q8IYK2 499 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 GPR101Q96P66 508 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-229ENST00000488765 SLITRK6Q9H5Y7 841 aa17.36■□□□□ 0.37
MCF2L-229ENST00000488765 GNPATO15228 680 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 NUDT17P0C025 328 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 DCAF17Q5H9S7 520 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-229ENST00000488765 NT5DC3Q86UY8 548 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 PYM1Q9BRP8 204 aaKnown RBP17.35■□□□□ 0.37
MCF2L-229ENST00000488765 VAT1LQ9HCJ6 419 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 CTTNBP2NLQ9P2B4 639 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 PRKAG3Q9UGI9 489 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 AMFRQ9UKV5 643 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 NUMBLQ9Y6R0 609 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 ABCC12Q96J65 1359 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 SPDYE16A6NNV3 312 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-229ENST00000488765 TPD52L2O43399 206 aaKnown RBP17.35■□□□□ 0.37
MCF2L-229ENST00000488765 GOLGA8HP0CJ92 632 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 SERPINB3P29508 390 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 ADGRA1Q86SQ6 560 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 MIPEPQ99797 713 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 SPATA16Q9BXB7 569 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 UBN1Q9NPG3 1134 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 FBXO3Q9UK99 471 aa17.35■□□□□ 0.37
MCF2L-229ENST00000488765 C2orf71A6NGG8 1288 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 RBAK-RBAKDNI3L0D1 243 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 TOM1O60784 492 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 USP1O94782 785 aa17.34■□□□□ 0.37
MCF2L-229ENST00000488765 KLRK1P26718 216 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms